RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 C16orf89Q6UX73 402 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 RASSF6Q6ZTQ3 369 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 CELF2-AS1Q8N7Q2 184 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 OR6K6Q8NGW6 343 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 SGMS2Q8NHU3 365 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 AMELYQ99218 206 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 PCGF1Q9BSM1 259 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 TSSK6Q9BXA6 273 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 NMNAT2Q9BZQ4 307 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 PPP1R3EQ9H7J1 279 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 MED20Q9H944 212 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 MARCH7Q9H992 704 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 FN3KRPQ9HA64 309 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 TNFRSF19Q9NS68 423 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 C1orf123Q9NWV4 160 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 ARL2BPQ9Y2Y0 163 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 N6AMT1Q9Y5N5 214 aa10.26□□□□□ -0.77
TPM3-204ENST00000323144 DHRS12A0PJE2 317 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 FAM183AA6NL82 134 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 A6NLC8 198 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 ZNF878C9JN71 531 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 LGALS8O00214 317 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 KCNAB3O43448 404 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 ADAM20O43506 726 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 ENSAO43768 121 aaKnown RBP10.25□□□□□ -0.77
TPM3-204ENST00000323144 FSTL3O95633 263 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 GASTP01350 101 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 GYPAP02724 150 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 PPIAL4GP0DN37 164 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 CFHR2P36980 270 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 CX3CR1P49238 355 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 CSNK2BP67870 215 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 OR8B8Q15620 311 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 PRR31Q5SQ13 230 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 LINC01590Q5TEZ4 76 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 LCN8Q6JVE9 175 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 DRAM2Q6UX65 266 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 FAM90A1Q86YD7 464 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 GCSAMQ8N6F7 178 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 SLC25A28Q96A46 364 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 TBX15Q96SF7 602 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 IL20Q9NYY1 176 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 DNAJC27Q9NZQ0 273 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 ACTR3BQ9P1U1 418 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 RNF7Q9UBF6 113 aa10.25□□□□□ -0.77
TPM3-204ENST00000323144 SAMHD1Q9Y3Z3 626 aaKnown RBP10.25□□□□□ -0.77
TPM3-204ENST00000323144 KIR2DS1A0A191URI9 304 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 hCG_38984A0A1B0GV85 526 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 hCG_1807616A0A1W2PRN6 198 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 OOEPA6NGQ2 149 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 CLDN34H7C241 214 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 TBX1O43435 398 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 DCTN3O75935 186 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 GRPP07492 148 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 MMP9P14780 707 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 MTNR1AP48039 350 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 POU4F2Q12837 409 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 EIF2B1Q14232 305 aaKnown RBP10.24□□□□□ -0.77
TPM3-204ENST00000323144 PCK2Q16822 640 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 GFOD2Q3B7J2 385 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 KLHL12Q53G59 568 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 SHISA2Q6UWI4 295 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 OR6N2Q8NGY6 317 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 CCDC124Q96CT7 223 aaKnown RBP10.24□□□□□ -0.77
TPM3-204ENST00000323144 KCNJ15Q99712 375 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 NIPSNAP1Q9BPW8 284 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 TRIM15Q9C019 465 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 RASSF4Q9H2L5 321 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 CENPMQ9NSP4 180 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 TAS2R1Q9NYW7 299 aa10.24□□□□□ -0.77
TPM3-204ENST00000323144 MRPL15Q9P015 296 aaKnown RBP10.24□□□□□ -0.77
TPM3-204ENST00000323144 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
TPM3-204ENST00000323144 XRCC2O43543 280 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 KRT36O76013 467 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 ANXA2P07355 339 aaKnown RBP10.23□□□□□ -0.77
TPM3-204ENST00000323144 HMGA2P52926 109 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 SLC25A1P53007 311 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 SRSF4Q08170 494 aaKnown RBP10.23□□□□□ -0.77
TPM3-204ENST00000323144 GPR157Q5UAW9 335 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 SLC16A9Q7RTY1 509 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 PIGWQ7Z7B1 504 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 ERI1Q8IV48 349 aaKnown RBP10.23□□□□□ -0.77
TPM3-204ENST00000323144 OR2T33Q8NG76 320 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 OR10G2Q8NGC3 310 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 ERGIC1Q969X5 290 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 SPSB4Q96A44 273 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 SEH1LQ96EE3 360 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 DGCR6LQ9BY27 220 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 SIRPDQ9H106 197 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 MAGIXQ9H6Y5 334 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 REEP1Q9H902 201 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 NDE1Q9NXR1 346 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 KLHDC2Q9Y2U9 406 aa10.23□□□□□ -0.77
TPM3-204ENST00000323144 NOP16Q9Y3C1 178 aaKnown RBP10.23□□□□□ -0.77
TPM3-204ENST00000323144 RIIAD1A6NNX1 92 aa10.22□□□□□ -0.77
TPM3-204ENST00000323144 SRRM5B3KS81 715 aa10.22□□□□□ -0.77
TPM3-204ENST00000323144 ZNF879B4DU55 563 aa10.22□□□□□ -0.77
TPM3-204ENST00000323144 ZNF593O00488 134 aaPredicted RBP10.22□□□□□ -0.77
TPM3-204ENST00000323144 GMDSO60547 372 aa10.22□□□□□ -0.77
TPM3-204ENST00000323144 TFF1P04155 84 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms