RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 YIPF6Q96EC8 236 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 USB1Q9BQ65 265 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 CENPOQ9BU64 300 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 PLEKHA1Q9HB21 404 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 NGBQ9NPG2 151 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 DUSP13Q9UII6 198 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
PDLIM5-202ENST00000318007 GABRPO00591 440 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 GPX5O75715 221 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 UBCP0CG48 685 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 FAHP16930 419 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 CCR9P51686 369 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 VBP1P61758 197 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 MALLQ13021 153 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 MRPL28Q13084 256 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 MSMPQ1L6U9 139 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 ACSM3Q53FZ2 586 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 OR2T2Q6IF00 324 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 FDX2Q6P4F2 183 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 LRP11Q86VZ4 500 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 SYT3Q9BQG1 590 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 PPIL3Q9H2H8 161 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 ISYNA1Q9NPH2 558 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 DHDHQ9UQ10 334 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 A0A1B0GTI1 187 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 AIREO43918 545 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 LILRA1O75019 489 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 ACKR3P25106 362 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 GNALP38405 381 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 NCS1P62166 190 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 TMEM255AQ5JRV8 349 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 NCMAPQ5T1S8 102 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 ZNF704Q6ZNC4 412 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 DMRTC2Q8IXT2 367 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 FAM169BQ8N8A8 192 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 FGGYQ96C11 551 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 DACH2Q96NX9 599 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 HHLA2Q9UM44 414 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 PIGLQ9Y2B2 252 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 ICE1Q9Y2F5 2266 aa13.25□□□□□ -0.29
PDLIM5-202ENST00000318007 DEFB108AA8MXU0 73 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 CRYBB2P43320 205 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 RAD52P43351 418 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 FAM3AP98173 230 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 YIF1BQ5BJH7 314 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 TMEM91Q6ZNR0 172 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 OR56B2PQ8NGI1 322 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 RPS4Y2Q8TD47 263 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 KLF14Q8TD94 323 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 GPR148Q8TDV2 347 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 CMBLQ96DG6 245 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 CA10Q9NS85 328 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 TBCCD1Q9NVR7 557 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 STUB1Q9UNE7 303 aa13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-202ENST00000318007 ABCA4P78363 2273 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 IGHV3-64DA0A0J9YX35 117 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 GGT3PA6NGU5 568 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 RGS9O75916 674 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 CD3EP07766 207 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 CALRP27797 417 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 PCSK6P29122 969 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 THBS4P35443 961 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 GSK3AP49840 483 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 MXD1Q05195 221 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 TNK1Q13470 666 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 CEP78Q5JTW2 689 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 TMEM244Q5VVB8 128 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 SLC16A12Q6ZSM3 486 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 ADAT3Q96EY9 351 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 MOV10Q9HCE1 1003 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 NOX4Q9NPH5 578 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 MYEF2Q9P2K5 600 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 PLCE1Q9P212 2302 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 A0A0U1RQV5 110 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 XRCC2O43543 280 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 HLA-DPB1P04440 258 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 Q499Y3 187 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 ZMAT1Q5H9K5 638 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 RGS7BPQ6MZT1 257 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 OR5L1Q8NGL2 311 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 HAVCR2Q8TDQ0 301 aa13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 TXNL4BQ9NX01 149 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-202ENST00000318007 hCG_38984A0A1B0GV85 526 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 SHISA9B4DS77 424 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 ZNF879B4DU55 563 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 DHRS3O75911 302 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 ISG15P05161 165 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 IGFBP2P18065 325 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 ACHEP22303 614 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 PSG7Q13046 419 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 DOK3Q7L591 496 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms