RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SLC25A35Q3KQZ1 300 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF684Q5T5D7 378 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 OTPQ5XKR4 325 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 DMKNQ6E0U4 476 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-201ENST00000317677 JMJD6Q6NYC1 403 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-201ENST00000317677 DNAAF1Q8NEP3 725 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 PAQR8Q8TEZ7 354 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 NEU1Q99519 415 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 ANGPTL4Q9BY76 406 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 TXNIPQ9H3M7 391 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 PCDHGA1Q9Y5H4 931 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 MRPS18BQ9Y676 258 aaKnown RBP11.6□□□□□ -0.55
CPNE1-201ENST00000317677 USP24Q9UPU5 2620 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 LIPT2A6NK58 231 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 TP53I11O14683 189 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF35P13682 527 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ANXA7P20073 488 aaKnown RBP11.59□□□□□ -0.55
CPNE1-201ENST00000317677 BDKRB2P30411 391 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 SSPNQ14714 243 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ARL9Q6T311 187 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 PRSS45Q7RTY3 260 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 OR1S2Q8NGQ3 325 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ABHD4Q8TB40 342 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 SLC25A28Q96A46 364 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 C14orf144Q96I85 54 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ADAT1Q9BUB4 502 aaKnown RBP11.59□□□□□ -0.55
CPNE1-201ENST00000317677 GGACTQ9BVM4 153 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 TMEM185BQ9H7F4 350 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 KLHL9Q9P2J3 617 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 A0A0G2JMM0 328 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 A0A1W2PPB8 328 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 A0A1W2PRS3 328 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 KIR3DP1A8MWS1 328 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 C1QTNF9BB2RNN3 333 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 PSMD9O00233 223 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 OGG1O15527 345 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 BCL2L11O43521 198 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 MT-ND4LP03901 98 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 C1QTNF9P0C862 333 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 CD79AP11912 226 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 CBR1P16152 277 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 KLK2P20151 261 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 RPS27P42677 84 aaKnown RBP11.59□□□□□ -0.55
CPNE1-201ENST00000317677 RAB2AP61019 212 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ZP4Q12836 540 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 RNASE12Q5GAN4 147 aaKnown RBP11.59□□□□□ -0.55
CPNE1-201ENST00000317677 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 REC114Q7Z4M0 266 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF227Q86WZ6 799 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 DMRTC2Q8IXT2 367 aaPredicted RBP11.59□□□□□ -0.55
CPNE1-201ENST00000317677 SYS1Q8N2H4 156 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 OR4K17Q8NGC6 315 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 OR13C5Q8NGS8 318 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 RNASE11Q8TAA1 199 aaKnown RBP11.59□□□□□ -0.55
CPNE1-201ENST00000317677 PSMF1Q92530 271 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 WDR76Q9H967 626 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 TMEM100Q9NV29 134 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 P4HTMQ9NXG6 502 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 MOKQ9UQ07 419 aa11.59□□□□□ -0.55
CPNE1-201ENST00000317677 AHCTF1Q8WYP5 2266 aa11.58□□□□□ -0.55
CPNE1-201ENST00000317677 A0A087WV48 116 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 LOC101059948A0A1B0GTJ6 334 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 KANTRA0A1W2PQU2 76 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 PRSS37A4D1T9 235 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF814B7Z6K7 855 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 TXNL1O43396 289 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
CPNE1-201ENST00000317677 RENP00797 406 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 EPXP11678 715 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ACHEP22303 614 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 PSMB10P40306 273 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 POU3F4P49335 361 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 SRSF4Q08170 494 aaKnown RBP11.58□□□□□ -0.56
CPNE1-201ENST00000317677 MYBPHQ13203 477 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 SSX2Q16385 188 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 LINC00303Q3SY05 128 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 C9orf152Q5JTZ5 239 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 FAM27D1Q5T7N8 215 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 SLC16A9Q7RTY1 509 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 CEACAM19Q7Z692 300 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF546Q86UE3 836 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 CDC20BQ86Y33 519 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 OR1J4Q8NGS1 313 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 FCAMRQ8WWV6 532 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 FOXN4Q96NZ1 517 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 AUNIPQ9H7T9 357 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 CHST11Q9NPF2 352 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ANKRD10Q9NXR5 420 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 VSX1Q9NZR4 365 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-201ENST00000317677 B3GAT1Q9P2W7 334 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 B9D1Q9UPM9 204 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 FREM3P0C091 2139 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 A0A1W2PNR3 127 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms