RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 VSIG4Q9Y279 399 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 SPEF1Q9Y4P9 236 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 IGKV1-9A0A0C4DH69 117 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 METTL21EPA6NDL7 271 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 LIPCP11150 499 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF20P17024 532 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 MLF1P58340 268 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 SCGB2B2Q4G0G5 96 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 SFRP5Q5T4F7 317 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 GLRX5Q86SX6 157 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 COQ3Q9NZJ6 369 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 A0A0J9YW62 118 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 F5H5P2 479 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 H3BUI4 141 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 WDPCPO95876 746 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 DSCR4P56555 118 aaPredicted RBP18.16■□□□□ 0.5
TTC39C-202ENST00000317571 LPAL2Q16609 132 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 RSPO1Q2MKA7 263 aaPredicted RBP18.16■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF584Q8IVC4 421 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM123Q8N131 208 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF283Q8N7M2 679 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM54Q969K7 222 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF837Q96EG3 531 aaPredicted RBP18.16■□□□□ 0.5
TTC39C-202ENST00000317571 WBP1Q96G27 269 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 SRXN1Q9BYN0 137 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 SELENOIQ9C0D9 397 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 LPAR5Q9H1C0 372 aa18.16■□□□□ 0.5
TTC39C-202ENST00000317571 NSG1A0A0A6YYJ2 146 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 POU3F2P20265 443 aaPredicted RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 Q0VFX4 171 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 RAB12Q6IQ22 244 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 ZIC4Q8N9L1 334 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 SSC4DQ8WTU2 575 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 LIN37Q96GY3 246 aaPredicted RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 SLC25A21Q9BQT8 299 aaPredicted RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 SLC39A1Q9NY26 324 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 RDH8Q9NYR8 311 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF107Q9UII5 783 aaPredicted RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 OR5H15A6NDH6 313 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 SMAD9O15198 467 aaKnown RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 ARPC5O15511 151 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 CER1O95813 267 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 C4BPBP20851 252 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 FKBP2P26885 142 aaKnown RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 CSNK1A1P48729 337 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 SEC61A1P61619 476 aaKnown RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 C10orf128Q5T292 105 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 GLIPR1L1Q6UWM5 242 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM156Q8N614 296 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 C1QTNF6Q9BXI9 259 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 FBLN5Q9UBX5 448 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF230Q9UIE0 474 aaPredicted RBP18.15■□□□□ 0.5
TTC39C-202ENST00000317571 KCNK7Q9Y2U2 307 aa18.15■□□□□ 0.5
TTC39C-202ENST00000317571 TNFSF11O14788 317 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 TECTAO75443 2155 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 PLAC9Q5JTB6 97 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 OR9K2Q8NGE7 335 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 OR14K1Q8NGZ2 314 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 RBPMSQ93062 196 aaKnown RBP18.14■□□□□ 0.5
TTC39C-202ENST00000317571 ZC3H10Q96K80 434 aaKnown RBP18.14■□□□□ 0.5
TTC39C-202ENST00000317571 KIF25Q9UIL4 384 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 DKKL1Q9UK85 242 aa18.14■□□□□ 0.5
TTC39C-202ENST00000317571 OR6C65A6NJZ3 312 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 IGLV3-1P01715 115 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 DHRS2Q13268 280 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 TCEAL6Q6IPX3 200 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 FOXL2NBQ6ZUU3 175 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 OR10R2Q8NGX6 335 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 TCEAL3Q969E4 200 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 HPF1Q9NWY4 346 aa18.14■□□□□ 0.49
TTC39C-202ENST00000317571 MRPS28Q9Y2Q9 187 aaKnown RBP18.14■□□□□ 0.49
TTC39C-202ENST00000317571 LOC100509620A0A075B734 347 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 DUSP3P51452 185 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 ZNF133P52736 654 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 CAPZA1P52907 286 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 HLXQ14774 488 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 PPP1R32Q7Z5V6 425 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 ZNF101Q8IZC7 436 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 LRRC18Q8N456 261 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 ZNF775Q96BV0 537 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 BANF2Q9H503 90 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 FN3KRPQ9HA64 309 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 MYOZ1Q9NP98 299 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 FXYD6-FXYD2A0A087WZ82 144 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 TRAV14DV4A0A0A6YYC5 116 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 TUBAL3A6NHL2 446 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 SOCS1O15524 211 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 MSR1P21757 451 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 NTF4P34130 210 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 CD96P40200 585 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 FOLR3P41439 243 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 B3GALT5-AS1P59052 145 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 LSM6P62312 80 aaKnown RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 ZXDAP98168 799 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 C1orf210Q8IVY1 113 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 C12orf45Q8N5I9 185 aaPredicted RBP18.13■□□□□ 0.49
TTC39C-202ENST00000317571 FXYD6Q9H0Q3 95 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 SLC2A8Q9NY64 477 aa18.13■□□□□ 0.49
TTC39C-202ENST00000317571 UPB1Q9UBR1 384 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms