RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SOX2P48431 317 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PPP2CAP67775 309 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MEP1BQ16820 701 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 Q6ZPB1 254 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF429Q86V71 674 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SLC35G3Q8N808 338 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 RPS4Y2Q8TD47 263 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 NANOS1Q8WY41 292 aaKnown RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PSMF1Q92530 271 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 R3HDM4Q96D70 268 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PGAM5Q96HS1 289 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PRRX2Q99811 253 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 AUNIPQ9H7T9 357 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 LRIT1Q9P2V4 623 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PADI3Q9ULW8 664 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 A0A1B0GVT2 93 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF727A8MUV8 499 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZBTB42B2RXF5 422 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 K7EQM0 130 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SLC10A3P09131 477 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 HNRNPA1P09651 372 aaKnown RBP eCLIP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 RPL29P47914 159 aaKnown RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 NPBWR2P48146 333 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM207Q6UWW9 146 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ADAMTSL4Q6UY14 1074 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 OTOP2Q7RTS6 562 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CMTM4Q8IZR5 234 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CLEC1AQ8NC01 280 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 BOD1Q96IK1 185 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF331Q9NQX6 463 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SOHLH2Q9NX45 425 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SRPK3Q9UPE1 567 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 A0A1B0GW64 132 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MAP1LC3B2A6NCE7 125 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 YY2O15391 372 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 FUT1P19526 365 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TRHRP34981 398 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SLC19A1P41440 591 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MMP16P51512 607 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 IL24Q13007 206 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CARD17Q5XLA6 110 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF776Q68DI1 518 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 NEIL2Q969S2 332 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ABHD6Q9BV23 337 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MAP1LC3BQ9GZQ8 125 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 C4orf47A7E2U8 309 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 HMGN4O00479 90 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 LEFTY1O75610 366 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CNMDO75829 334 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CYC1P08574 325 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 RAD52P43351 418 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SIM1P81133 766 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 GPNMBQ14956 572 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 LINC00303Q3SY05 128 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TIGITQ495A1 244 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TP53I3Q53FA7 332 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 AWAT1Q58HT5 328 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PRAMEF20Q5VT98 475 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CXCL17Q6UXB2 119 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 LRRTM3Q86VH5 581 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 OSTM1Q86WC4 334 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PIANPQ8IYJ0 282 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ACOT4Q8N9L9 421 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ATG101Q9BSB4 218 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 C2orf88Q9BSF0 95 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNF442Q9H7R0 627 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 CFAP46Q8IYW2 2715 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 PDHXO00330 501 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 DCTN6O00399 190 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 AGPAT2O15120 278 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 GPR75O95800 540 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MYOGP15173 224 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SLC6A11P48066 632 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SUB1P53999 127 aaKnown RBP eCLIP4.1□□□□□ -1.752e-6■■■□□ 17.6
CNOT1-201ENST00000317147 GLYATL3Q5SZD4 288 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 THEM4Q5T1C6 240 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SLC48A1Q6P1K1 146 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 LYPD8Q6UX82 237 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 UEVLDQ8IX04 471 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 C2orf73Q8N5S3 287 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZNRF4Q8WWF5 429 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ARHGDIGQ99819 225 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 NRIP2Q9BQI9 281 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 C1orf198Q9H425 327 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SFXN1Q9H9B4 322 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 YIPF1Q9Y548 306 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 FLVCR1Q9Y5Y0 555 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TRAV36DV7A0A075B6V5 113 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 A0A1B0GTL3 188 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 TMEM269A0A1B0GVZ9 245 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 RBFOX3A6NFN3 312 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ADM5C9JUS6 153 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 HIST1H1BP16401 226 aaKnown RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 DPP4P27487 766 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 MSX1P28360 303 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 SHC1P29353 583 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ACVRL1P37023 503 aa4.1□□□□□ -1.75
CNOT1-201ENST00000317147 NKX2-1P43699 371 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-201ENST00000317147 ZXDBP98169 803 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms