RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 IGHV5-51A0A0C4DH38 117 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 A0A1W2PQD3 144 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 PRAMEF26H0Y7S4 382 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 ADAP1O75689 374 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 H2BFMP0C1H6 154 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 HAAOP46952 286 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 EFNA3P52797 238 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 CYCSP99999 105 aaKnown RBP11.95□□□□□ -0.5
SKA3-202ENST00000314759 TMEM128Q5BJH2 165 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 TERB2Q8NHR7 220 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 GPR119Q8TDV5 335 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
SKA3-202ENST00000314759 CYYR1Q96J86 154 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 C5orf66Q9H5L9 145 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 RNF122Q9H9V4 155 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 FAM206AQ9NX38 181 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 SOHLH2Q9NX45 425 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 RPH3AQ9Y2J0 694 aaPredicted RBP11.95□□□□□ -0.5
SKA3-202ENST00000314759 SLCO1B1Q9Y6L6 691 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 NUDT19A8MXV4 375 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 TMEM150CB9EJG8 249 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 MS4A18H0YCH9 400 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 UBE2CO00762 179 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 AHSA1O95433 338 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 THEGLP0DJG4 465 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 TBPP20226 339 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 CAPZBP47756 277 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 PLCXD2Q0VAA5 305 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 MS4A18Q3C1V0 323 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 ZNF585AQ6P3V2 769 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 DEGS2Q6QHC5 323 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 IL34Q6ZMJ4 242 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 COX15Q7KZN9 410 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 ANGPTL5Q86XS5 388 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 RNF133Q8WVZ7 376 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 HIST1H2BAQ96A08 127 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 SPSB2Q99619 263 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 OR5AC2Q9NZP5 309 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 IGKV3D-11A0A0A0MRZ8 115 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 FTCDNL1E5RQL4 147 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 FOLR2P14207 255 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 GABRG2P18507 467 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 LPAR6P43657 344 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 CAV2P51636 162 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 GFERP55789 205 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 TAS2R31P59538 309 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 HGFACQ04756 655 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 FABP9Q0Z7S8 132 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 C5orf46Q6UWT4 87 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 GRINAQ7Z429 371 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 OR13C9Q8NGT0 318 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
SKA3-202ENST00000314759 SEBOXQ9HB31 216 aaPredicted RBP11.94□□□□□ -0.5
SKA3-202ENST00000314759 A0A0A6YYD4 124 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 TXNL1O43396 289 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 SYT7O43581 403 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 S100A6P06703 90 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 NPY4RP50391 375 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 SLC9A3R2Q15599 337 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 DRAM2Q6UX65 266 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 TTLL10Q6ZVT0 673 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 ZNF248Q8NDW4 579 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 SLC22A8Q8TCC7 542 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 ASB10Q8WXI3 467 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
SKA3-202ENST00000314759 SPACA5Q96QH8 159 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 LRRC61Q9BV99 259 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 SEC61A2Q9H9S3 476 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 S100A8P05109 93 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 RD3LP0DJH9 198 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 PI3P19957 117 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 CPT2P23786 658 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 CD80P33681 288 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 PPM1FP49593 454 aaPredicted RBP11.93□□□□□ -0.5
SKA3-202ENST00000314759 EMP2P54851 167 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 CLDN6P56747 220 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 TDGQ13569 410 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 HLA-DQA1Q5Y7H0 255 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 CLEC18BQ6UXF7 455 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 CDC6Q99741 560 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 SMCO4Q9NRQ5 59 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 SERPINA5P05154 406 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 GSK3AP49840 483 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 ACER2Q5QJU3 275 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.93□□□□□ -0.5
SKA3-202ENST00000314759 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 TMEM104Q8NE00 496 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 OR5D14Q8NGL3 314 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 ISOC2Q96AB3 205 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 ARL5BQ96KC2 179 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 TGM7Q96PF1 710 aa11.93□□□□□ -0.5
SKA3-202ENST00000314759 EGLN1Q9GZT9 426 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms