RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TNFSF14O43557 240 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 PRAMEF4O60810 478 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ALKAL2Q6UX46 152 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 OR4A16Q8NH70 328 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 LINC01599Q8WXQ3 324 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ALG1L2C9J202 215 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 HOXB1P14653 301 aaPredicted RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 IL24Q13007 206 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 FAM181AQ8N9Y4 354 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ABHD1Q96SE0 405 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ST6GALNAC5Q9BVH7 336 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 J3QW42 95 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 HSD17B6O14756 317 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF16P17020 682 aaPredicted RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 RAB35Q15286 201 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 PABPC1L2AQ5JQF8 200 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 DCAF12Q5T6F0 453 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 PRSS54Q6PEW0 395 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 EIF4E3Q8N5X7 224 aaKnown RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 CADM4Q8NFZ8 388 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 SH2D1BO14796 132 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 DOK2O60496 412 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 SLC22A13Q9Y226 551 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 TMEM265A0A087WTH1 108 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 SEC11BP0C7V7 166 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 C6orf132Q5T0Z8 1188 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF610Q8N9Z0 462 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 CCDC74AQ96AQ1 378 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 TNFRSF13CQ96RJ3 184 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 BEX1Q9HBH7 125 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 DEGS1O15121 323 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 DHRS3O75911 302 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ORM1P02763 201 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 CLEC3BP05452 202 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ENPP1P22413 925 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 BEND4Q6ZU67 534 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ANGPTL5Q86XS5 388 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 AUNIPQ9H7T9 357 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ANKRD20A5PA0PJZ0 165 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ANGPTL7O43827 346 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 PDE6DO43924 150 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 APOA2P02652 100 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 HIST1H1CP16403 213 aaKnown RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 TPPP2P59282 170 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 LEXMQ3ZCV2 418 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF648Q5T619 568 aaPredicted RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 NUDCD2Q8WVJ2 157 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 FGF13Q92913 245 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 MUCL1Q96DR8 90 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 SF3B5Q9BWJ5 86 aaKnown RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 KLKB1P03952 638 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 FAM3BP58499 235 aaPredicted RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 CFAP77Q6ZQR2 320 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 TOMM40LQ969M1 308 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 C14orf79Q96F83 325 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 AKR1E2Q96JD6 320 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF331Q9NQX6 463 aaPredicted RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 MARCH5Q9NX47 278 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 CLEC2DQ9UHP7 191 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 F5H5K5 113 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF44P15621 663 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 PNLIPP16233 465 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 CTRB1P17538 263 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 P2RY1P47900 373 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 CTRB2Q6GPI1 263 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 SLC25A42Q86VD7 318 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 HAND1O96004 215 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 MT-ND6P03923 174 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF17P17021 662 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 SLC16A11Q8NCK7 471 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 TMEM255BQ8WV15 326 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ZNRF4Q8WWF5 429 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 C12orf57Q99622 126 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ANGPTL4Q9BY76 406 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 FLVCR1Q9Y5Y0 555 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 OR8U8P0C7N1 319 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 PGA4P0DJD7 388 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 PGA5P0DJD9 388 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 LIPHQ8WWY8 451 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 RBM14Q96PK6 669 aaKnown RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 WDR77Q9BQA1 342 aaPredicted RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 SLC25A18Q9H1K4 315 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 ABCA4P78363 2273 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 NKX6-3A6NJ46 265 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 SNRNP70P08621 437 aaKnown RBP7.98□□□□□ -1.13
COL6A5-202ENST00000312481 OR8G3PP0DMU2 310 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 NMNAT3Q96T66 252 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 FREM1Q5H8C1 2179 aa7.98□□□□□ -1.13
COL6A5-202ENST00000312481 A0A1W2PR48 441 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 LMO7DNF2Z398 122 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 IRS1P35568 1242 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PMELP40967 661 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF136P52737 540 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 TEX30Q5JUR7 227 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 AADACL3Q5VUY0 350 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 IL17FQ96PD4 163 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 GALNT9Q9HCQ5 603 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CD207Q9UJ71 328 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 KCNAB3O43448 404 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms