RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MAP2K6P52564 334 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 TGFBR3Q03167 851 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PCK2Q16822 640 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 SPANXN5Q5MJ07 72 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 DCXRQ7Z4W1 244 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 OR13C5Q8NGS8 318 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 UBTD2Q8WUN7 234 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GINS3Q9BRX5 216 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GPR160Q9UJ42 338 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PIGLQ9Y2B2 252 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 SSUH2Q9Y2M2 353 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 TRAV36DV7A0A075B6V5 113 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TRAV34A0A0B4J273 112 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 WDR88Q6ZMY6 472 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ZNF66Q6ZN08 573 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 H2BFWTQ7Z2G1 175 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 LYG2Q86SG7 212 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ZNF485Q8NCK3 441 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 C2orf50Q96LR7 162 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 MYO5AQ9Y4I1 1855 aaKnown RBP7.42□□□□□ -1.22
VPS41-202ENST00000310301 SLC2A10O95528 541 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 RAB38P57729 211 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 Q3ZCU0 254 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 C1QTNF12Q5T7M4 302 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 OR2A2Q6IF42 318 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 FAM26EQ8N5C1 309 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ZNF775Q96BV0 537 aaPredicted RBP7.42□□□□□ -1.22
VPS41-202ENST00000310301 SARAFQ96BY9 339 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ARSGQ96EG1 525 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 NUDT9Q9BW91 350 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TBC1D29Q9UFV1 150 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TCRBV5S2A0A599 114 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TMEM8BA6NDV4 472 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 FIGNL2A6NMB9 653 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 PNLIPP16233 465 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 PI3P19957 117 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 DCTDP32321 178 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 SOX18P35713 384 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TMEM183BQ1AE95 376 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ZNF626Q68DY1 528 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ACSM5Q6NUN0 579 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 SLC38A6Q8IZM9 456 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TMEM104Q8NE00 496 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TMEM37Q8WXS4 190 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 GLIPR2Q9H4G4 154 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 MMP26Q9NRE1 261 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 GPR173Q9NS66 373 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 CROCCQ5TZA2 2017 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 A0A087X0M5 115 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 A0A1B0GX30 115 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ZAR1LA6NP61 321 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 C21orf140B9A014 251 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 SDCBPO00560 298 aaPredicted RBP7.42□□□□□ -1.22
VPS41-202ENST00000310301 TAPBPO15533 448 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 CTNSO60931 367 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 CST2P09228 141 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 CTF1Q16619 201 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 Q1RN00 199 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TIGITQ495A1 244 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 GALNT16Q8N428 558 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 C11orf42Q8N5U0 333 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 OR6S1Q8NH40 331 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 OR10J5Q8NHC4 309 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TM4SF18Q96CE8 201 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 DSCR3O14972 297 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TTRP02766 147 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 HIST1H3AP68431 136 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 NKAIN4Q8IVV8 208 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 FAM24BQ8N5W8 94 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 OR2G2Q8NGZ5 317 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 ASB13Q8WXK3 278 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 RNF150Q9ULK6 438 aa7.42□□□□□ -1.22
VPS41-202ENST00000310301 A0A1W2PNV4 684 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 XKRY2A2RUG3 117 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 M0R143 59 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TERTO14746 1132 aaKnown RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 LY86O95711 162 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 CLEC3BP05452 202 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 CEACAM5P06731 702 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 DOC2BQ14184 412 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 GUK1Q16774 197 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 ACOT6Q3I5F7 207 aaPredicted RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 SLC16A12Q6ZSM3 486 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 CCDC190Q86UF4 302 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 RPS19BP1Q86WX3 136 aaKnown RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 MRGPRX3Q96LB0 322 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 RAB18Q9NP72 206 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 SLC2A8Q9NY64 477 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 GOLT1BQ9Y3E0 138 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 CD14P08571 375 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 HRH1P35367 487 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 BAMBIQ13145 260 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TOMM34Q15785 309 aaPredicted RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 ZNF750Q32MQ0 723 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 TMEM176BQ3YBM2 270 aaPredicted RBP7.41□□□□□ -1.22
VPS41-202ENST00000310301 C9orf152Q5JTZ5 239 aa7.41□□□□□ -1.22
VPS41-202ENST00000310301 LIPNQ5VXI9 398 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms