RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 THRSPQ92748 146 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 ADAT3Q96EY9 351 aaPredicted RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 TP63Q9H3D4 680 aaPredicted RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 TCF7L1Q9HCS4 588 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF275Q9NSD4 429 aaPredicted RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 CRNNQ9UBG3 495 aaPredicted RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 COMMD3Q9UBI1 195 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 ATPIF1Q9UII2 106 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 DAPK2Q9UIK4 370 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 PROCRQ9UNN8 238 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 CMAHPQ9Y471 501 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 PRRC2CQ9Y520 2896 aaKnown RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 ARPC4-TTLL3A0A0A6YYG9 625 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 A0A0U1RQV5 110 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 A0A1B0GVI7 797 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 A0A1W2PR80 420 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CLDN25C9JDP6 229 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 HAX1O00165 279 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PRRG2O14669 202 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PDCD5O14737 125 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 MAGEB3O15480 346 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 HPGDSO60760 199 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 UBL3O95164 117 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PAHP00439 452 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 APOC1P02654 83 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CD2P06729 351 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 HOXD4P09016 255 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CCL2P13500 99 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 EDN3P14138 238 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CFL1P23528 166 aaKnown RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 S100A5P33763 92 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 ARR3P36575 388 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 ETV6P41212 452 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 HES5Q5TA89 166 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 DOK3Q7L591 496 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 LUZP2Q86TE4 346 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 MDP1Q86V88 176 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 MYPOPQ86VE0 399 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CXorf67Q86X51 503 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 COMMD2Q86X83 199 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PARP16Q8N5Y8 322 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PLPP7Q8NBV4 271 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 OR14K1Q8NGZ2 314 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 OR2AE1Q8NHA4 323 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 S100ZQ8WXG8 99 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 AP3S1Q92572 193 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 BORCS5Q969J3 196 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 FGGYQ96C11 551 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 FAM71F1Q96KD3 344 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 ZFP3Q96NJ6 502 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 WDFY2Q96P53 400 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 NKX3-1Q99801 234 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 SH3BGRL2Q9UJC5 107 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 FOXJ3Q9UPW0 622 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 V9GY05 133 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 SHANK1Q9Y566 2161 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CIB4A0PJX0 185 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 IFITM5A6NNB3 132 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 TTLL8A6PVC2 850 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 AIPO00170 330 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 LCATP04180 440 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CELA3BP08861 270 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 COX5BP10606 129 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 SNRPBP14678 240 aaKnown RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 STOMP27105 288 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PRSS12P56730 875 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 MADCAM1Q13477 382 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF846Q147U1 533 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 GSG1Q2KHT4 349 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 EIF2S3LQ2VIR3 472 aaKnown RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 GLYATL3Q5SZD4 288 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 TMEM53Q6P2H8 277 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF474Q6S9Z5 364 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 COLCA1Q6ZS62 124 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 Q6ZSR3 168 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 CROCCP3Q8IVE0 287 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 PAQR4Q8N4S7 273 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 WDR31Q8NA23 367 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 OR5H6Q8NGV6 325 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 SGK3Q96BR1 496 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 BOD1Q96IK1 185 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 POM121L2Q96KW2 1035 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 SDHCQ99643 169 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 C1QTNF5Q9BXJ0 243 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 WDR12Q9GZL7 423 aaKnown RBP6.04□□□□□ -1.44
PTCD2-201ENST00000308077 SLITRK2Q9H156 845 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 OR10A2Q9H208 303 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 HMG20AQ9NP66 347 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 V9GYH0 126 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 V9GYS6 101 aa6.04□□□□□ -1.44
PTCD2-201ENST00000308077 hCG_2014768A0A024R1R8 64 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 A0A0G2JNJ9 132 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 C5orf49A4QMS7 147 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ANXA2P2A6NMY6 339 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 DHRS3O75911 302 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF14P17017 642 aaPredicted RBP6.03□□□□□ -1.44
PTCD2-201ENST00000308077 DDOSTP39656 456 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 CLDN12P56749 244 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 PPP3R1P63098 170 aa6.03□□□□□ -1.44
PTCD2-201ENST00000308077 TGFBR3Q03167 851 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms