RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 OR1F12Q8NHA8 337 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 SMIM4Q8WVI0 70 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 SLC7A6Q92536 515 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 YIPF5Q969M3 257 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 APH1AQ96BI3 265 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 LYZL4Q96KX0 146 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 SOX7Q9BT81 388 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 OR2H1Q9GZK4 316 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 TMEM138Q9NPI0 162 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 RBFOX1Q9NWB1 397 aaKnown RBP10.39□□□□□ -0.75
TRIM40-205ENST00000307859 CGGBP1Q9UFW8 167 aaPredicted RBP10.39□□□□□ -0.75
TRIM40-205ENST00000307859 TIMM10BQ9Y5J6 103 aa10.39□□□□□ -0.75
TRIM40-205ENST00000307859 MGAQ8IWI9 3026 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 K7ENP7 123 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 LDLRAD4O15165 306 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 FARS2O95363 451 aaKnown RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 TGM6O95932 706 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 DBHP09172 617 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF20P17024 532 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 RAB3AP20336 220 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 AGTR1P30556 359 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 GNALP38405 381 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 SLC6A9P48067 706 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 INPP1P49441 399 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ARF1P84077 181 aaKnown RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 DGCR2P98153 550 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 PLA2G7Q13093 441 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 C2orf76Q3KRA6 126 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 GLYATL3Q5SZD4 288 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ANKRD16Q6P6B7 361 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 PGAP1Q75T13 922 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF554Q86TJ5 538 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 IZUMO1Q8IYV9 350 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 CELF2-AS1Q8N7Q2 184 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 OR52H1Q8NGJ2 320 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 FGFBP3Q8TAT2 258 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 FAM71F1Q96KD3 344 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ZFP3Q96NJ6 502 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 NEURL2Q9BR09 285 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 WNT5BQ9H1J7 359 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 METTL17Q9H7H0 456 aaPredicted RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 PLEKHA1Q9HB21 404 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 PLSCR2Q9NRY7 297 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 CLCF1Q9UBD9 225 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ATPIF1Q9UII2 106 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 MRPS7Q9Y2R9 242 aaKnown RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 N6AMT1Q9Y5N5 214 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 V9GYS6 101 aa10.38□□□□□ -0.75
TRIM40-205ENST00000307859 ANKRD17O75179 2603 aaKnown RBP10.38□□□□□ -0.75
TRIM40-205ENST00000307859 TMEM272A0A1B0GTI8 110 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 CTAG2O75638 210 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 DHRS3O75911 302 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 ERCC1P07992 297 aaPredicted RBP10.37□□□□□ -0.75
TRIM40-205ENST00000307859 ABOP16442 354 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 CDK2P24941 298 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 KIR2DL3P43628 341 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 HTR5AP47898 357 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 CAPZA1P52907 286 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 TPTEP56180 551 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 MRPS10P82664 201 aaKnown RBP10.37□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF169Q14929 603 aaPredicted RBP10.37□□□□□ -0.75
TRIM40-205ENST00000307859 SLC36A2Q495M3 483 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 TMEM69Q5SWH9 247 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF57Q68EA5 555 aaPredicted RBP10.37□□□□□ -0.75
TRIM40-205ENST00000307859 SIAH3Q8IW03 269 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 CDH26Q8IXH8 852 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 OR5AS1Q8N127 324 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 JAGN1Q8N5M9 183 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 DUSP18Q8NEJ0 188 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 AKR7LQ8NHP1 331 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 C15orf40Q8WUR7 153 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 SORCS2Q96PQ0 1159 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 UQCC2Q9BRT2 126 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF224Q9NZL3 707 aa10.37□□□□□ -0.75
TRIM40-205ENST00000307859 CLEC18AA5D8T8 446 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GABARAPH6UMI1 98 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 XRCC3O43542 346 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 PATE4P0C8F1 98 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 TMIGD3P0DMS9 266 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GABRA1P14867 456 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 THBS4P35443 961 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 EFNB2P52799 333 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 TAS2R20P59543 309 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 HGFACQ04756 655 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 SNAI3Q3KNW1 292 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 SFRP5Q5T4F7 317 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CLEC18BQ6UXF7 455 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 DNM1P46Q6ZS02 220 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 BIVMQ86UB2 503 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF100Q8IYN0 542 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CLEC18CQ8NCF0 446 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 OR52N4Q8NGI2 321 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 OR4D6Q8NGJ1 314 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 OR13C9Q8NGT0 318 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CHAC2Q8WUX2 184 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms