RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ZNF420Q8TAQ5 688 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ADAMTS14Q8WXS8 1223 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 KCNK15Q9H427 330 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 COA4Q9NYJ1 87 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM235A6NFC5 223 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 MT-ATP6P00846 226 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 PLAURQ03405 335 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 C19orf57Q0VDD7 668 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CLEC9AQ6UXN8 241 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ARIH2OSQ8N7S6 290 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CADM4Q8NFZ8 388 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 SLC7A13Q8TCU3 470 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 MRGPRDQ8TDS7 321 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 HLXQ14774 488 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF788Q6ZQV5 615 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CREB3L2Q70SY1 520 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 GDPD1Q8N9F7 314 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ERGIC1Q969X5 290 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 IP6K3Q96PC2 410 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 SIGLEC11Q96RL6 698 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 FLRT3Q9NZU0 649 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 RAB22AQ9UL26 194 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 NRXN3Q9Y4C0 1643 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 TRGV10A0A0A0MS01 117 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CISD3P0C7P0 127 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 INSL4Q14641 139 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 DRAM2Q6UX65 266 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ADPRHL1Q8NDY3 354 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 MRGPRX3Q96LB0 322 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ICAM5Q9UMF0 924 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 PSG11Q9UQ72 335 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 FLVCR1Q9Y5Y0 555 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CHEK1O14757 476 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 THBS1P07996 1170 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 MMP7P09237 267 aaPredicted RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 MICBQ29980 383 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM108Q6UXF1 575 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 TFAP2EQ6VUC0 442 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM123Q8N131 208 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 LINC01555Q8NAE3 123 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 APH1BQ8WW43 257 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ZNRF4Q8WWF5 429 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 SLCO5A1Q9H2Y9 848 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 MED9Q9NWA0 146 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 TCFL5Q9UL49 500 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 KIF13AQ9H1H9 1805 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ANKUB1A6NFN9 424 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 FTH1P19P0C7X4 201 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 NID1P14543 1247 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OPRK1P41145 380 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 CTU2Q2VPK5 515 aaKnown RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 OR52B4Q8NGK2 314 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR2G3Q8NGZ4 309 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ALPLP05186 524 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF32P17041 273 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 SNRPNP63162 240 aaKnown RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 SMUG1Q53HV7 270 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 TSEN54Q7Z6J9 526 aaKnown RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 ABHD3Q8WU67 409 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR8B4Q96RC9 309 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PLCH1Q4KWH8 1693 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 COX7A2P2O60397 106 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 CR2P20023 1033 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 S100A7AQ86SG5 101 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ADGRE4PQ86SQ3 457 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 MOGAT3Q86VF5 341 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR8U1Q8NH10 309 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 SLC25A43Q8WUT9 341 aaPredicted RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 RAB1BQ9H0U4 201 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 UGT2A1Q9Y4X1 527 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 C1orf196B1AJZ1 125 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 LIMK1P53667 647 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 RAB5BP61020 215 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PPP1CBP62140 327 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR2F1Q13607 317 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 CLVS2Q5SYC1 327 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 LRRC28Q86X40 367 aaPredicted RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 CMTM4Q8IZR5 234 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 HAVCR2Q8TDQ0 301 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 LINC00052Q96N35 136 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF696Q9H7X3 374 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PRR13Q9NZ81 148 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 SEC14L6B5MCN3 397 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 IGLV3-27P01718 113 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 NFYAP23511 347 aaPredicted RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 DRD3P35462 400 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 HTRA4P83105 476 aaPredicted RBP7□□□□□ -1.29
SCN9A-201ENST00000303354 MESP2Q0VG99 397 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PLK5Q496M5 336 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 C5orf46Q6UWT4 87 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 PLPP5Q8NEB5 264 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OR10R2Q8NGX6 335 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 OLIG1Q8TAK6 271 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 SDK1Q7Z5N4 2213 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 TCRBV3S1A0A5B6 114 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 F6UZH7 168 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 UBL3O95164 117 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 KRASP01116 189 aa7□□□□□ -1.29
SCN9A-201ENST00000303354 KIAA0141Q14154 515 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms