RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NDFIP1Q9BT67 221 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 SLC22A13Q9Y226 551 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 SOX21Q9Y651 276 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 WSB1Q9Y6I7 421 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 LRP6O75581 1613 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 COL2A1P02458 1487 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 MYH2Q9UKX2 1941 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 PLPP1O14494 284 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 IGHV3-9P01782 118 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 EPXP11678 715 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 CYBAP13498 195 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 GPR12P47775 334 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 GPM6AP51674 278 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 ST3GAL2Q16842 350 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 TMPRSS11FQ6ZWK6 438 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 UBE3DQ7Z6J8 389 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 LILRA3Q8N6C8 439 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 RBM14Q96PK6 669 aaKnown RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 CSF3RQ99062 836 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 IKZF5Q9H5V7 419 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 DECR2Q9NUI1 292 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 M0R082 166 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 CNN1P51911 297 aaKnown RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 GRINAQ7Z429 371 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 CISD2Q8N5K1 135 aaKnown RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 ERGIC1Q969X5 290 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 MED19A0JLT2 244 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 OR5K3A6NET4 321 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 NPPBP16860 134 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 SSR4P51571 173 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 AGFG1P52594 562 aaKnown RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 BPIFB3P59826 476 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 CDKN3Q16667 212 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 OR4S1Q8NGB4 309 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 ZNF346Q9UL40 294 aaKnown RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 CLEC18AA5D8T8 446 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 CLEC18CQ8NCF0 446 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 GOT1L1Q8NHS2 421 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 TOE1Q96GM8 510 aaKnown RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 CRYABP02511 175 aaKnown RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 OR5AL1P0C617 328 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 EDEM2Q9BV94 578 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 NRSN2Q9GZP1 204 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 DLL4Q9NR61 685 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 hCG_1809904A0A1W2PP81 198 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 A0A1W2PR64 198 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 A0A1W2PRV1 198 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 TRMT12Q53H54 448 aaKnown RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 SYS1Q8N2H4 156 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 FAAP24Q9BTP7 215 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 GPR84Q9NQS5 396 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 A0A1W2PPE2 198 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 NDUFB7P17568 137 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
SCN3B-201ENST00000299333 C12orf49Q9H741 205 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 SIRT7Q9NRC8 400 aa13.48□□□□□ -0.25
SCN3B-201ENST00000299333 OR2M5A3KFT3 312 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 ONECUT2O95948 504 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 LGALS4P56470 323 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 JAM3Q9BX67 310 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CSNK1G1Q9HCP0 422 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 DHCR7Q9UBM7 475 aaKnown RBP13.47□□□□□ -0.25
SCN3B-201ENST00000299333 USP3Q9Y6I4 520 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 SCRG1O75711 98 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CER1O95813 267 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 IL5P05113 134 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 SUCLG1P53597 346 aaKnown RBP13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CSNK1G2P78368 415 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 TBC1D28Q2M2D7 210 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 LEMD1Q68G75 181 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 STUMQ69YW2 141 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 ZNF738Q8NE65 137 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CRYGNQ8WXF5 182 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 TAAR9Q96RI9 348 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 FCN1O00602 326 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CST4P01036 141 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CTSAP10619 480 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 DHODHQ02127 395 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 TRIB1Q96RU8 372 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 RTL8AQ9BWD3 113 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 ELOA3CA0A087WX78 387 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-201ENST00000299333 A6NDN8 102 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-201ENST00000299333 EMP1P54849 157 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 TPBGQ13641 420 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 TMEM128Q5BJH2 165 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 TMEM229BQ8NBD8 167 aa13.47□□□□□ -0.25
SCN3B-201ENST00000299333 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-201ENST00000299333 MEIKINA0A087WXM9 373 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms