RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MAP6Q96JE9 813 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 AMELYQ99218 206 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 TTTY10Q9BZA0 68 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 COMMD4Q9H0A8 199 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 HDHD2Q9H0R4 259 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 DDX28Q9NUL7 540 aaKnown RBP18.18■□□□□ 0.5
SMCO4-201ENST00000298966 TXNL4BQ9NX01 149 aaKnown RBP18.18■□□□□ 0.5
SMCO4-201ENST00000298966 ATPIF1Q9UII2 106 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 LRP12Q9Y561 859 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 MALRD1Q5VYJ5 2156 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 PNMA8CA0A1B0GUJ8 204 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 ACOD1A6NK06 481 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 TMEM212A6NML5 194 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 RGS9O75916 674 aaPredicted RBP18.17■□□□□ 0.5
SMCO4-201ENST00000298966 SERPINB10P48595 397 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 GDI2P50395 445 aaKnown RBP18.17■□□□□ 0.5
SMCO4-201ENST00000298966 MMP16P51512 607 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 SRSF2Q01130 221 aaKnown RBP18.17■□□□□ 0.5
SMCO4-201ENST00000298966 FABP5Q01469 135 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 TGFBR3Q03167 851 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 SLC36A2Q495M3 483 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 YIF1BQ5BJH7 314 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 ZNF813Q6ZN06 617 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 LINC00299Q6ZSB3 139 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 LINGO2Q7L985 606 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 CCDC36Q8IYA8 594 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 TMEM203Q969S6 136 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 PGLYRP3Q96LB9 341 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 CCDC59Q9P031 241 aaKnown RBP18.17■□□□□ 0.5
SMCO4-201ENST00000298966 R4GMQ9 66 aa18.17■□□□□ 0.5
SMCO4-201ENST00000298966 MAGEB4O15481 346 aaPredicted RBP18.16■□□□□ 0.5
SMCO4-201ENST00000298966 LMX1BO60663 402 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 GATBO75879 557 aaKnown RBP18.16■□□□□ 0.5
SMCO4-201ENST00000298966 HOXB1P14653 301 aaPredicted RBP18.16■□□□□ 0.5
SMCO4-201ENST00000298966 ZNF16P17020 682 aaPredicted RBP18.16■□□□□ 0.5
SMCO4-201ENST00000298966 P2RY6Q15077 328 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 RAB35Q15286 201 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 TAF13Q15543 124 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 SLC16A14Q7RTX9 510 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 OR2G2Q8NGZ5 317 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 RNF166Q96A37 237 aaPredicted RBP18.16■□□□□ 0.5
SMCO4-201ENST00000298966 BOD1Q96IK1 185 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 KCTD7Q96MP8 289 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 TMED9Q9BVK6 235 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 CACNG6Q9BXT2 260 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 ZNF281Q9Y2X9 895 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 GRIP1Q9Y3R0 1128 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 TIMM10BQ9Y5J6 103 aa18.16■□□□□ 0.5
SMCO4-201ENST00000298966 GABRPO00591 440 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 HSD11B1P28845 292 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 TGFBR1P36897 503 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 PSMA6P60900 246 aaKnown RBP18.15■□□□□ 0.5
SMCO4-201ENST00000298966 ARF1P84077 181 aaKnown RBP18.15■□□□□ 0.5
SMCO4-201ENST00000298966 ELFN2Q5R3F8 820 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 C1QTNF12Q5T7M4 302 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 OR7E24Q6IFN5 339 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 ANKRD16Q6P6B7 361 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 CORO6Q6QEF8 472 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 SEZ6L2Q6UXD5 910 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 CFAP77Q6ZQR2 320 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 Q6ZT83 130 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 BHLHA15Q7RTS1 189 aaPredicted RBP18.15■□□□□ 0.5
SMCO4-201ENST00000298966 C1orf162Q8NEQ5 155 aaPredicted RBP18.15■□□□□ 0.5
SMCO4-201ENST00000298966 OR5AK2Q8NH90 309 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 GHSRQ92847 366 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 ZNF837Q96EG3 531 aaPredicted RBP18.15■□□□□ 0.5
SMCO4-201ENST00000298966 C4orf45Q96LM5 186 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 KCNJ15Q99712 375 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 ATF6BQ99941 703 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 CENPMQ9NSP4 180 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 A3GALT2U3KPV4 340 aa18.15■□□□□ 0.5
SMCO4-201ENST00000298966 SHISA9B4DS77 424 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 LOC110117498-PIK3R3F6TDL0 507 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 PSMD9O00233 223 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 CLPXO76031 633 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 RPP14O95059 124 aaKnown RBP18.14■□□□□ 0.49
SMCO4-201ENST00000298966 B4GALT1P15291 398 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 MAPK3P27361 379 aaPredicted RBP18.14■□□□□ 0.49
SMCO4-201ENST00000298966 PSMB10P40306 273 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 SLC3A1Q07837 685 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 RNF167Q9H6Y7 350 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 SP140LQ9H930 580 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 PNRC2Q9NPJ4 139 aaKnown RBP18.14■□□□□ 0.49
SMCO4-201ENST00000298966 PRSS50Q9UI38 385 aa18.14■□□□□ 0.49
SMCO4-201ENST00000298966 OR4C45A6NMZ5 311 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 ABCD4O14678 606 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 WIPF1O43516 503 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 SGCEO43556 437 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 SRSF10O75494 262 aaKnown RBP18.13■□□□□ 0.49
SMCO4-201ENST00000298966 SC5DO75845 299 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 IL1AP01583 271 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 IGHV3-9P01782 118 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 IGHV4-31P0DP07 118 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 ARR3P36575 388 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 PPA1Q15181 289 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 C22orf42Q6IC83 251 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 TMEM91Q6ZNR0 172 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 CATSPERDQ86XM0 798 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 LRRC18Q8N456 261 aa18.13■□□□□ 0.49
SMCO4-201ENST00000298966 OR10S1Q8NGN2 331 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms