RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 OR6M1Q8NGM8 313 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 CACNG6Q9BXT2 260 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 GPR35Q9HC97 309 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 HRASLSQ9HDD0 168 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 TMEM38BQ9NVV0 291 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 MRPL33O75394 65 aaKnown RBP18.71■□□□□ 0.58
SOX17-201ENST00000297316 TGM6O95932 706 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 HIST1H3AP68431 136 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 GUCA2AQ02747 115 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 C1orf100Q5SVJ3 147 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 HIST2H3PS2Q5TEC6 136 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 FAM27BQ5VT28 67 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 C9orf135Q5VTT2 229 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 FAAP20Q6NZ36 180 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 DNM1P46Q6ZS02 220 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 HIST2H3AQ71DI3 136 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 COMMD2Q86X83 199 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 OR13C9Q8NGT0 318 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 FAM71F1Q96KD3 344 aaPredicted RBP18.71■□□□□ 0.58
SOX17-201ENST00000297316 CNTD2Q9H8S5 307 aa18.71■□□□□ 0.58
SOX17-201ENST00000297316 TRAV17A0A0B4J275 112 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 MEGF11A6BM72 1044 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 DBHP09172 617 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 FOXG1P55316 489 aaPredicted RBP18.7■□□□□ 0.58
SOX17-201ENST00000297316 GRB2P62993 217 aaKnown RBP18.7■□□□□ 0.58
SOX17-201ENST00000297316 GJC3Q8NFK1 279 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 OR1M1Q8NGA1 313 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 FGFBP3Q8TAT2 258 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 TMEM45BQ96B21 275 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 SLC7A10Q9NS82 523 aa18.7■□□□□ 0.58
SOX17-201ENST00000297316 TRAV18A0A075B6X5 111 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 F5H5K5 113 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 LDLRAD4O15165 306 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 BDKRB2P30411 391 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 BTG1P62324 171 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 SFRP4Q6FHJ7 346 aaPredicted RBP18.69■□□□□ 0.58
SOX17-201ENST00000297316 ZNF529Q6P280 563 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 CPT1CQ8TCG5 803 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 ATG5Q9H1Y0 275 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 ANKRD20A5PA0PJZ0 165 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 K7EM74 188 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 PDGFAP04085 211 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 CTSSP25774 331 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 FAPQ12884 760 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 LYZL4Q96KX0 146 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 FOXB1Q99853 325 aa18.69■□□□□ 0.58
SOX17-201ENST00000297316 C7orf50Q9BRJ6 194 aaKnown RBP18.69■□□□□ 0.58
SOX17-201ENST00000297316 A0A0A6YYJ9 748 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 ERP29P30040 261 aaKnown RBP18.68■□□□□ 0.58
SOX17-201ENST00000297316 MRPS10P82664 201 aaKnown RBP18.68■□□□□ 0.58
SOX17-201ENST00000297316 CHMP1BQ7LBR1 199 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 NUFIP2Q7Z417 695 aaKnown RBP18.68■□□□□ 0.58
SOX17-201ENST00000297316 NKAIN3Q8N8D7 197 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 SPACA5Q96QH8 159 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 SLCO5A1Q9H2Y9 848 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 PLEK2Q9NYT0 353 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 NUBP2Q9Y5Y2 271 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 CCL1P22362 96 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 ADGRE4PQ86SQ3 457 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 SPTBN4Q9H254 2564 aa18.68■□□□□ 0.58
SOX17-201ENST00000297316 ALDOBP05062 364 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 MOGAT2Q3SYC2 334 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 ELFN2Q5R3F8 820 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 RIPPLY2Q5TAB7 128 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 LIX1LQ8IVB5 337 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 OR5AS1Q8N127 324 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 ZFAND1Q8TCF1 268 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 TMEM138Q9NPI0 162 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 DIABLOQ9NR28 239 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 SLC17A5Q9NRA2 495 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 MCUBQ9NWR8 336 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 CACNA1GO43497 2377 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 MEIS3P1A6NDR6 274 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 CPN1P15169 458 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 ZNF20P17024 532 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 GZMKP49863 264 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 DMRTC1Q5HYR2 192 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 ZNF774Q6NX45 483 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 SLC22A24Q8N4F4 322 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 GRPEL2Q8TAA5 225 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 PGAM5Q96HS1 289 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 TAAR6Q96RI8 345 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 BCO1Q9HAY6 547 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 EMC3Q9P0I2 261 aa18.67■□□□□ 0.58
SOX17-201ENST00000297316 FCER2P06734 321 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 GABRA1P14867 456 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 ZNF32P17041 273 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 RAB3AP20336 220 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 SLC6A9P48067 706 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 SKA3Q8IX90 412 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 OR5D14Q8NGL3 314 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 AKR7LQ8NHP1 331 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 SNIP1Q8TAD8 396 aaKnown RBP18.66■□□□□ 0.58
SOX17-201ENST00000297316 SORCS2Q96PQ0 1159 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 ELF5Q9UKW6 265 aaPredicted RBP18.66■□□□□ 0.58
SOX17-201ENST00000297316 FLVCR2Q9UPI3 526 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 ECDO95905 644 aaPredicted RBP18.66■□□□□ 0.58
SOX17-201ENST00000297316 IGLV3-1P01715 115 aa18.66■□□□□ 0.58
SOX17-201ENST00000297316 OTX1P32242 354 aaPredicted RBP18.66■□□□□ 0.58
SOX17-201ENST00000297316 RRAS2P62070 204 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms