RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF587BE7ETH6 402 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SGCEO43556 437 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SYNGR3O43761 229 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 APOC1P02654 83 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 MAS1P04201 325 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 CD37P11049 281 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SLC2A1P11166 492 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ZNF32P17041 273 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 CCL1P22362 96 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 CRYGSP22914 178 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 HLA-DMAP28067 261 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 AGTR1P30556 359 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 PCBD1P61457 104 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ECH1Q13011 328 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 IKZF1Q13422 519 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 RPUSD3Q6P087 351 aaKnown RBP13.61□□□□□ -0.23
LSM6-201ENST00000296581 ZNF813Q6ZN06 617 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 COMMD7Q86VX2 200 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SKA3Q8IX90 412 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ST8SIA2Q92186 375 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ZNF275Q9NSD4 429 aaPredicted RBP13.61□□□□□ -0.23
LSM6-201ENST00000296581 ZNF319Q9P2F9 582 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ELF5Q9UKW6 265 aaPredicted RBP13.61□□□□□ -0.23
LSM6-201ENST00000296581 LOC400499M0QZD8 3231 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ANXA2P2A6NMY6 339 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 MKRN2OSH3BPM6 223 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 K7EM74 188 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SYT7O43581 403 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ANXA2P07355 339 aaKnown RBP13.61□□□□□ -0.23
LSM6-201ENST00000296581 ANOS1P23352 680 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 ARF1P84077 181 aaKnown RBP13.61□□□□□ -0.23
LSM6-201ENST00000296581 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SLC16A14Q7RTX9 510 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 GMPPAQ96IJ6 420 aaPredicted RBP13.61□□□□□ -0.23
LSM6-201ENST00000296581 IFT46Q9NQC8 304 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 GLRX2Q9NS18 164 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 TAS2R4Q9NYW5 299 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 EXTL2Q9UBQ6 330 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 CKLFQ9UBR5 152 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 TIMM10BQ9Y5J6 103 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 MED12LQ86YW9 2145 aa13.61□□□□□ -0.23
LSM6-201ENST00000296581 A0A1B0GVI7 797 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 OR6C6A6NF89 314 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 LMX1BO60663 402 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 SS18L1O75177 396 aaPredicted RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 FARS2O95363 451 aaKnown RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 IGLV3-1P01715 115 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 MMP7P09237 267 aaPredicted RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 CALCBP10092 127 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 AZGP1P25311 298 aaKnown RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 BTN1A1Q13410 526 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 FIP1L1Q6UN15 594 aaKnown RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 FAM57BQ71RH2 274 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 ZNF100Q8IYN0 542 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 OR8H3Q8N146 312 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 DNAAF1Q8NEP3 725 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 OR1F12Q8NHA8 337 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 OR51E1Q8TCB6 317 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 LGALS14Q8TCE9 139 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 SPTSSAQ969W0 71 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 SLC22A4Q9H015 551 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 K7ENP7 123 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 M0R135 149 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 TSC22D2O75157 780 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 PER3P56645 1201 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 PSG4Q00888 419 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 BAK1Q16611 211 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 ZNF774Q6NX45 483 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 INO80CQ6PI98 192 aaPredicted RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 ZNF782Q6ZMW2 699 aaPredicted RBP13.6□□□□□ -0.23
LSM6-201ENST00000296581 LUZP2Q86TE4 346 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 FGFBP3Q8TAT2 258 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 ST8SIA4Q92187 359 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 ZNF799Q96GE5 643 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 OR2H1Q9GZK4 316 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 WNT5BQ9H1J7 359 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 UPB1Q9UBR1 384 aa13.6□□□□□ -0.23
LSM6-201ENST00000296581 DCHS1Q96JQ0 3298 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 F5H5K5 113 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 SCAND1P57086 179 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 IL18Q14116 193 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 P2RY14Q15391 338 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 P4HA3Q7Z4N8 544 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 PGAM5Q96HS1 289 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 RNF121Q9H920 327 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 MALT1Q9UDY8 824 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
LSM6-201ENST00000296581 A0A0U1RQV5 110 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 MEGF11A6BM72 1044 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 OR14I1A6ND48 311 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 SMLR1H3BR10 107 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 PATE4P0C8F1 98 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 FOXG1P55316 489 aaPredicted RBP13.59□□□□□ -0.23
LSM6-201ENST00000296581 ZNF273Q14593 569 aa13.59□□□□□ -0.23
LSM6-201ENST00000296581 PYDC2Q56P42 97 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms