RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TAS2R4Q9NYW5 299 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 A6NCN8 305 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 GDF1P27539 372 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF92Q03936 586 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF750Q32MQ0 723 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 DBX2Q6ZNG2 339 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 H1FNTQ75WM6 255 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 LILRA3Q8N6C8 439 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 FAM71CQ8NEG0 241 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 HSD17B8Q92506 261 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 WDR89Q96FK6 387 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF845Q96IR2 970 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 PARP12Q9H0J9 701 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMEFF2Q9UIK5 374 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 CD3DP04234 171 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 EPXP11678 715 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 HIST1H1CP16403 213 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 PRPH2P23942 346 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 SDHAP31040 664 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 EGR3Q06889 387 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 PDZD11Q5EBL8 140 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 IL34Q6ZMJ4 242 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 LYG2Q86SG7 212 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 SEMA6DQ8NFY4 1073 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 PIGTQ969N2 578 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 C2orf50Q96LR7 162 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 RHNO1Q9BSD3 238 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 CABLES2Q9BTV7 478 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 FKRPQ9H9S5 495 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF331Q9NQX6 463 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 MYF5P13349 255 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 APEHP13798 732 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 HOXA1P49639 335 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR10A3P58181 314 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF385BQ569K4 471 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 LIPHQ8WWY8 451 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 TSLPQ969D9 159 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 MS4A6EQ96DS6 147 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 PTDSS2Q9BVG9 487 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 RYDENQ9NUL5 291 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF586Q9NXT0 402 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 NXT1Q9UKK6 140 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 BOKQ9UMX3 212 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ASB1Q9Y576 335 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 GALP22466 123 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 NPBWR1P48145 328 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 UBE2MP61081 183 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 SNRPNP63162 240 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 ISXQ2M1V0 245 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 CALHM3Q86XJ0 350 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 PPP1R1CQ8WVI7 109 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC35A4Q96G79 324 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 CCDC74BQ96LY2 380 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 GPR160Q9UJ42 338 aa10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 COA3Q9Y2R0 106 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-201ENST00000293748 CHD5Q8TDI0 1954 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 CABIN1Q9Y6J0 2220 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 PPM1DO15297 605 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 HYAL3O43820 417 aaPredicted RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC2A10O95528 541 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 ABHD16AO95870 558 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 FABP6P51161 128 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF85Q03923 595 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 BAMBIQ13145 260 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 WDR74Q6RFH5 385 aaPredicted RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 BTLAQ7Z6A9 289 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 PPP1R3BQ86XI6 285 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF547Q8IVP9 402 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR8U1Q8NH10 309 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC25A43Q8WUT9 341 aaPredicted RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 NTNG1Q9Y2I2 539 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZC3H12DA2A288 527 aaKnown RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 RFPL4AA6NLU0 287 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 RFPL4AL1F8VTS6 287 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 M0R082 166 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 DOK2O60496 412 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 DCTDP32321 178 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 SOX18P35713 384 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 MAT1AQ00266 395 aaKnown RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 B4GALNT1Q00973 533 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC38A9Q8NBW4 561 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF485Q8NCK3 441 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 BANF2Q9H503 90 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 AUNIPQ9H7T9 357 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 NEUROG3Q9Y4Z2 214 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 FLVCR1Q9Y5Y0 555 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 PTAFRP25105 342 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 FKBP2P26885 142 aaKnown RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 CASP6P55212 293 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 HAGHQ16775 308 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 NKAIN2Q5VXU1 208 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 GLDNQ6ZMI3 551 aaPredicted RBP10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 STAC2Q6ZMT1 411 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 TAAR9Q96RI9 348 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 CSF3RQ99062 836 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 KCNJ15Q99712 375 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 WWTR1Q9GZV5 400 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 TOLLIPQ9H0E2 274 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms