RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ZNF425Q6IV72 752 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 Q6ZS52 159 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 ZNF547Q8IVP9 402 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 SLC35E1Q96K37 410 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 VN1R1Q9GZP7 353 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 AUNIPQ9H7T9 357 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-201ENST00000292478 OIP5O43482 229 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 PCNPQ8WW12 178 aaKnown RBP11.51□□□□□ -0.57
PTCD1-201ENST00000292478 TAAR6Q96RI8 345 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 IGHV1OR21-1A0A087WYE8 117 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 A0A0B4J203 849 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 PTAFRP25105 342 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 RPS27P42677 84 aaKnown RBP11.51□□□□□ -0.57
PTCD1-201ENST00000292478 GSK3AP49840 483 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 OR8G2PQ6IF36 304 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 DRAM2Q6UX65 266 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 CDC20BQ86Y33 519 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 CDH26Q8IXH8 852 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 ZDHHC22Q8N966 263 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 TEX19Q8NA77 164 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 FOXB1Q99853 325 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 ST3GAL6Q9Y274 331 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 C20orf202A1L168 122 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 TGOLN2O43493 480 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 ADH4P08319 380 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 TAF9Q16594 264 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 RTL8BQ17RB0 113 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 SCCPDHQ8NBX0 429 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 SUCNR1Q9BXA5 334 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 FAM234AQ9H0X4 552 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 GON4LQ3T8J9 2241 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 NDUFB7P17568 137 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 DCTDP32321 178 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 TMEM268Q5VZI3 342 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 H3F3CQ6NXT2 135 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 GALNT16Q8N428 558 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 OR1L3Q8NH93 324 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
PTCD1-201ENST00000292478 SIRT3Q9NTG7 399 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-201ENST00000292478 EFSO43281 561 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 SNRPNP63162 240 aaKnown RBP11.5□□□□□ -0.57
PTCD1-201ENST00000292478 DMWDQ09019 674 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 TESK1Q15569 626 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 GLDNQ6ZMI3 551 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-201ENST00000292478 VN1R4Q7Z5H5 301 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 ANKRD37Q7Z713 158 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 Q8IYB0 196 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 MARCH1Q8TCQ1 289 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 DERL3Q96Q80 235 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 S1PR3Q99500 378 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 NKX6-2Q9C056 277 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-201ENST00000292478 AK3Q9UIJ7 227 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 FLVCR2Q9UPI3 526 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 SHROOM3Q8TF72 1996 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 SIRPB1O00241 398 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 MYBPHQ13203 477 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 C8orf82Q6P1X6 216 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-201ENST00000292478 TMEM182Q6ZP80 229 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-201ENST00000292478 TMPRSS7Q7RTY8 843 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 BAP18Q8IXM2 172 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 PTDSS2Q9BVG9 487 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 SDCBPO00560 298 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-201ENST00000292478 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 LRP3O75074 770 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 B4GALT1P15291 398 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 ACKR3P25106 362 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 EMP3P54852 163 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 NXPH1P58417 271 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 SLC25A26Q70HW3 274 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 AMER3Q8N944 861 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 ARSGQ96EG1 525 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 CFHR5Q9BXR6 569 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 ARRDC1-AS1Q9H2J1 176 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
PTCD1-201ENST00000292478 A0A096LPE4 126 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 IGHV3-15A0A0B4J1V0 119 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 A0A1W2PPZ6 126 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 C5orf67F2Z3F1 127 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ADRB1P08588 477 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 HAAOP46952 286 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 RNPS1Q15287 305 aaKnown RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ADIRFQ15847 76 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 OR10P1Q8NGE3 313 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 HPSE2Q8WWQ2 592 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 RDH5Q92781 318 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 NUP205Q92621 2012 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 PRKNO60260 465 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 RAB1AP62820 205 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 INSM1Q01101 510 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 FAM199XQ6PEV8 388 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms