RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 HHIPQ96QV1 700 aa13.38□□□□□ -0.27
SEC16A-202ENST00000290037 SORBS1Q9BX66 1292 aaKnown RBP13.38□□□□□ -0.27
SEC16A-202ENST00000290037 WDR61Q9GZS3 305 aaKnown RBP13.38□□□□□ -0.27
SEC16A-202ENST00000290037 VSX1Q9NZR4 365 aaPredicted RBP13.38□□□□□ -0.27
SEC16A-202ENST00000290037 IFNL4K9M1U5 179 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 MMP9P14780 707 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 PCBP4P57723 403 aaKnown RBP13.37□□□□□ -0.27
SEC16A-202ENST00000290037 CLDN2P57739 230 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 CTF1Q16619 201 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 LCN10Q6JVE6 187 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 VSTM2AQ8TAG5 236 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 TPRP12270 2363 aaKnown RBP13.37□□□□□ -0.27
SEC16A-202ENST00000290037 OMGP23515 440 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 ACKR4Q9NPB9 350 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 GNG13Q9P2W3 67 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 PPP6CO00743 305 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 FGF2P09038 288 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 ACSM4P0C7M7 580 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 FAM219AQ8IW50 185 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 PBOV1Q9GZY1 135 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 V9GYS6 101 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 SHEQ5VZ18 495 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 TEX261Q6UWH6 196 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 GPR87Q9BY21 358 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 SHARPINQ9H0F6 387 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 SLC22A13Q9Y226 551 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 U3KQ87 197 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 PRRG2O14669 202 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 SCAMP1O15126 338 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 NCR1O76036 304 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 ZNF239Q16600 458 aaKnown RBP13.37□□□□□ -0.27
SEC16A-202ENST00000290037 C18orf63Q68DL7 685 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 RPUSD3Q6P087 351 aaKnown RBP13.37□□□□□ -0.27
SEC16A-202ENST00000290037 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 OSR2Q8N2R0 312 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 GPBAR1Q8TDU6 330 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 LINC01599Q8WXQ3 324 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 ANAPC16Q96DE5 110 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 NKX2-5P52952 324 aaPredicted RBP13.37□□□□□ -0.27
SEC16A-202ENST00000290037 SDSLQ96GA7 329 aa13.37□□□□□ -0.27
SEC16A-202ENST00000290037 GPX5O75715 221 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 FCRLBQ6BAA4 426 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 FAM111BQ6SJ93 734 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 GMPPAQ96IJ6 420 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 FAM186AA6NE01 2351 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 RAB27BO00194 218 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 ATF1P18846 271 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 PSMB5P28074 263 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 HOXD4P09016 255 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 PAQR6Q6TCH4 344 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 POM121L2Q96KW2 1035 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 SLIRPQ9GZT3 109 aaKnown RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 CD37P11049 281 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 CYB5R2Q6BCY4 276 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 CTDSP1Q9GZU7 261 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 SPTBP11277 2137 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 ANKRD34CP0C6C1 535 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 VEGFBP49765 207 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 DEFB103AP81534 67 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 CDONQ4KMG0 1287 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 TRMT12Q53H54 448 aaKnown RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 WDR74Q6RFH5 385 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 P2RY10O00398 339 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 NFAM1Q8NET5 270 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-202ENST00000290037 OR52I2Q8NH67 350 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 TWSG1Q9GZX9 223 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 TMPRSS5Q9H3S3 457 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 THYN1Q9P016 225 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 PROCRQ9UNN8 238 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 GBF1Q92538 1859 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 A0A0B4J2A0 478 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 ICMTO60725 284 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 TUSC2O75896 110 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 C11orf87Q6NUJ2 197 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 REEP6Q96HR9 211 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 SHPKQ9UHJ6 478 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 MPC1Q9Y5U8 109 aa13.36□□□□□ -0.27
SEC16A-202ENST00000290037 FBXO24O75426 580 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 OPN1MWP04001 364 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 OR4D9Q8NGE8 314 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 OR13D1Q8NGV5 346 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
SEC16A-202ENST00000290037 UPK1AO00322 258 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 IL20RBQ6UXL0 311 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 Q96M85 177 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 PUS1Q9Y606 427 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEC16A-202ENST00000290037 GNG3P63215 75 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 ALKAL2Q6UX46 152 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
SEC16A-202ENST00000290037 C12orf76Q8N812 135 aaPredicted RBP13.35□□□□□ -0.27
SEC16A-202ENST00000290037 DEFA4P12838 97 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms