RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CD82P27701 267 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 STAC2Q6ZMT1 411 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 ZDHHC16Q969W1 377 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 MGMTP16455 207 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 SOX8P57073 446 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 GNG3P63215 75 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 OR8G2PQ6IF36 304 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 M1APQ8TC57 530 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 ZNF768Q9H5H4 540 aaKnown RBP16.65■□□□□ 0.26
PCDH1-201ENST00000287008 C19orf12Q9NSK7 152 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 GALR2O43603 387 aaPredicted RBP16.65■□□□□ 0.26
PCDH1-201ENST00000287008 NKX6-1P78426 367 aaPredicted RBP16.65■□□□□ 0.26
PCDH1-201ENST00000287008 C2orf76Q3KRA6 126 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 CMTM2Q8TAZ6 248 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 RANGRFQ9HD47 186 aaPredicted RBP16.65■□□□□ 0.26
PCDH1-201ENST00000287008 DLL4Q9NR61 685 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 SMIM15Q7Z3B0 74 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 CMTM4Q8IZR5 234 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 NUDCD2Q8WVJ2 157 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 SLC35E1Q96K37 410 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 COMMD5Q9GZQ3 224 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 C1orf196B1AJZ1 125 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 RFX2P48378 723 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 C20orf85Q9H1P6 137 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 UCK1Q9HA47 277 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 SDCBPO00560 298 aaPredicted RBP16.64■□□□□ 0.25
PCDH1-201ENST00000287008 CT62P0C5K7 136 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 THBS4P35443 961 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 CBLN3Q6UW01 205 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 LINC00299Q6ZSB3 139 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 OSR2Q8N2R0 312 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 MRPS24Q96EL2 167 aaKnown RBP16.64■□□□□ 0.25
PCDH1-201ENST00000287008 PLA2G12AQ9BZM1 189 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 ARV1Q9H2C2 271 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 PPP3CBP16298 524 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 SLC25A1P53007 311 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 COL13A1Q5TAT6 717 aaPredicted RBP16.64■□□□□ 0.25
PCDH1-201ENST00000287008 SPINK14Q6IE38 97 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 SSX9Q7RTT3 188 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 CDC20BQ86Y33 519 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 SLC35B4Q969S0 331 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 FN3KRPQ9HA64 309 aa16.64■□□□□ 0.25
PCDH1-201ENST00000287008 NCOR1O75376 2440 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 IGHV5-10-1A0A0J9YXX1 117 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 TMIGD3P0DMS9 266 aaPredicted RBP16.63■□□□□ 0.25
PCDH1-201ENST00000287008 FCN2Q15485 313 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 TMPRSS7Q7RTY8 843 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 BTLAQ7Z6A9 289 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 OR2Z1Q8NG97 314 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 OR13G1Q8NGZ3 307 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 SPSB1Q96BD6 273 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 ZNF391Q9UJN7 358 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 PPP1R3CQ9UQK1 317 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 NDUFB3O43676 98 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 OR5H8P0DN80 308 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 RPS16P62249 146 aaKnown RBP16.63■□□□□ 0.25
PCDH1-201ENST00000287008 UBE2IP63279 158 aaKnown RBP16.63■□□□□ 0.25
PCDH1-201ENST00000287008 Q6ZRG5 221 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 GDF15Q99988 308 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 SEC22CQ9BRL7 303 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 FBXO34Q9NWN3 711 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 OR2M5A3KFT3 312 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 RAC3P60763 192 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 FMODQ06828 376 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 ZNF141Q15928 474 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 LRRC10Q5BKY1 277 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 OR2B11Q5JQS5 317 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 GON7Q9BXV9 100 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 GNB4Q9HAV0 340 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 COPS3Q9UNS2 423 aa16.63■□□□□ 0.25
PCDH1-201ENST00000287008 TRGV10A0A0A0MS01 117 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 IGHV4-34P06331 123 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 OPCMLQ14982 345 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 ALKBH6Q3KRA9 238 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 OR1S2Q8NGQ3 325 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 OIT3Q8WWZ8 545 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 COL4A5P29400 1685 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 ACACAQ13085 2346 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 UCNP55089 124 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 FABP5Q01469 135 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 ARPC5LQ9BPX5 153 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 LRP12Q9Y561 859 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 NXPH3O95157 252 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 EML2O95834 649 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 ZNF32P17041 273 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 GP2P55259 537 aaKnown RBP16.62■□□□□ 0.25
PCDH1-201ENST00000287008 GNB1P62873 340 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 DBPQ10586 325 aaPredicted RBP16.62■□□□□ 0.25
PCDH1-201ENST00000287008 DMRTC1Q5HYR2 192 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 RNF167Q9H6Y7 350 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 NINQ8N4C6 2090 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 MICBQ29980 383 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 MSRB3Q8IXL7 192 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 LOXL4Q96JB6 756 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
PCDH1-201ENST00000287008 A0A1W2PR80 420 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ALKAL2Q6UX46 152 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 RHOUQ7L0Q8 258 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 GPR32P1Q8NGA4 272 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms