RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PJVKQ0ZLH3 352 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 HLXQ14774 488 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ELAVL1Q15717 326 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SYT14P1Q58G82 188 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 OR52I2Q8NH67 350 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 HGDQ93099 445 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ADAT1Q9BUB4 502 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 HDAC8Q9BY41 377 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 MED12Q93074 2177 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TRAV20A0A0B4J274 112 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SMAD6O43541 496 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 QDPRP09417 244 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ACY3Q96HD9 319 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TXNIPQ9H3M7 391 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM231Q9H6L2 316 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF346Q9UL40 294 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 MCM3APO60318 1980 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 A0A1B0GTQ1 180 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 OR2J2O76002 312 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 GCAP28676 217 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 OR1L1Q8NH94 360 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 DUS3LQ96G46 650 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM56Q96MV1 263 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 LAMB1P07942 1786 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 H3BVH4 76 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 RBP4P02753 201 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 FAM87AP0C7U9 286 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 FAM3AP98173 230 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ABLIM2Q6H8Q1 611 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 WDR31Q8NA23 367 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 WBP2Q969T9 261 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 IFT22Q9H7X7 185 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 FKBP11Q9NYL4 201 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 AKR7A3O95154 331 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 GCGP01275 180 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 EGR3Q06889 387 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 PMS2P11Q13670 270 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM88Q6PEY1 159 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 B3GNT9Q6UX72 402 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 EXD3Q8N9H8 876 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 DYRK2Q92630 601 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 RDH5Q92781 318 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 FAM117AQ9C073 453 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 GAL3ST2Q9H3Q3 398 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 MAST2Q6P0Q8 1798 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 GYPAP02724 150 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 DGCR2P98153 550 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 PHYHIPLQ96FC7 376 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 NAA50Q9GZZ1 169 aaKnown RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 FCN1O00602 326 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ERV3-1Q14264 604 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 HTR3DQ70Z44 454 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM116Q8NCL8 245 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 PTDSS2Q9BVG9 487 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 SMCHD1A6NHR9 2005 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ALDOCP09972 364 aaKnown RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF789Q5FWF6 425 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF66Q6ZN08 573 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 Q6ZPB1 254 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 WFDC8Q8IUA0 241 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 SMIM19Q96E16 107 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 EGLN2Q96KS0 407 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 MMP26Q9NRE1 261 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TIAM2Q8IVF5 1701 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 RGPD2P0DJD1 1756 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 DNASE2O00115 360 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 SEMA7AO75326 666 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM81Q6P7N7 255 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 SLC16A12Q6ZSM3 486 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 BAP18Q8IXM2 172 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TXNRD2Q9NNW7 524 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 RCL1Q9Y2P8 373 aaKnown RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 SDHBP21912 280 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 MARCH3Q86UD3 253 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 SLAMF6Q96DU3 332 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 ADGRG7Q96K78 797 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 GPX7Q96SL4 187 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 MAGT1Q9H0U3 335 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 FBXO4Q9UKT5 387 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 PIK3C2AO00443 1686 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TRAV34A0A0B4J273 112 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 HRASP01112 189 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 CTSLP07711 333 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 CYBAP13498 195 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 TEAD1P28347 426 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 GJA4P35212 333 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 DHRS13Q6UX07 377 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 C6orf15Q6UXA7 325 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-201ENST00000282516 OR51E1Q8TCB6 317 aa7.94□□□□□ -1.14
NIPBL-201ENST00000282516 OR2T8A6NH00 312 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 IL2RAP01589 272 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 RHOBP62745 196 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR1C1Q15619 314 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR1L4Q8NGR5 311 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 ST8SIA1Q92185 356 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms