RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SSX6Q7RTT6 188 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 THAP5Q7Z6K1 395 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 BIVMQ86UB2 503 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 MOGAT3Q86VF5 341 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 C8orf59Q8N0T1 100 aaPredicted RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 FTMTQ8N4E7 242 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 BOLLQ8N9W6 283 aaKnown RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 OR8B12Q8NGG6 310 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 OR2T27Q8NH04 317 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 CNIH3Q8TBE1 160 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 SGK3Q96BR1 496 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 MRPL48Q96GC5 212 aaKnown RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 GAL3ST1Q99999 423 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 ADI1Q9BV57 179 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 PBOV1Q9GZY1 135 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 VCX3BQ9H321 246 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 RGCCQ9H4X1 137 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 RNPEPL1Q9HAU8 725 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 PLEKHA1Q9HB21 404 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 DLL4Q9NR61 685 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 UFSP2Q9NUQ7 469 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 HAO2Q9NYQ3 351 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 NKIRAS2Q9NYR9 191 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 UBAP1Q9NZ09 502 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 NKX1-2Q9UD57 310 aaPredicted RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 IL19Q9UHD0 177 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 PPP1R3CQ9UQK1 317 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 NOP16Q9Y3C1 178 aaKnown RBP5.55□□□□□ -1.52
CD44-204ENST00000279452 ABCA12Q86UK0 2595 aa5.55□□□□□ -1.52
CD44-204ENST00000279452 CELSR2Q9HCU4 2923 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 DSCAMO60469 2012 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 IGHV4-61A0A0C4DH41 118 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 hCG_38984A0A1B0GV85 526 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 A0A1B0GVI7 797 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 hCG_1807616A0A1W2PRN6 198 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 METTL15A6NJ78 407 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 LRRC30A6NM36 301 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ANXA2P2A6NMY6 339 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 J3QLW9 94 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 P2RY10O00398 339 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 CASQ2O14958 399 aaPredicted RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 SLC16A6O15403 523 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 MLNRO43193 412 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 RP2O75695 350 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 FADS2O95864 444 aaKnown RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 LY6G6DO95868 133 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 CYB5R3P00387 301 aaPredicted RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 GRPP07492 148 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 CD55P08174 381 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ZNF19P17023 458 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 PSMB10P40306 273 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 CRYBB2P43320 205 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 GSK3AP49840 483 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ACTA2P62736 377 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ACTG2P63267 376 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 FAM3AP98173 230 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ROM1Q03395 351 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 LOXL1Q08397 574 aaPredicted RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 SNCBQ16143 134 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 SMN1Q16637 294 aaKnown RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 TMEM249Q2WGJ8 235 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 SPRNQ5BIV9 151 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 C6orf52Q5T4I8 152 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ZNF691Q5VV52 312 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 PRAMEF6Q5VXH4 476 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 DEGS2Q6QHC5 323 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 DNM1P46Q6ZS02 220 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ACBD7Q8N6N7 88 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 OR11L1Q8NGX0 322 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ZNF420Q8TAQ5 688 aaPredicted RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 OR51E1Q8TCB6 317 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 PIGCQ92535 297 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 RAB1CQ92928 201 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 LGALS12Q96DT0 336 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 MEGF10Q96KG7 1140 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 HIST1H2AAQ96QV6 131 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 SIGLEC11Q96RL6 698 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 MYCBPQ99417 103 aaPredicted RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 SLC30A2Q9BRI3 323 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ALG8Q9BVK2 526 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 REPIN1Q9BWE0 567 aaKnown RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 SLC22A4Q9H015 551 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 MOB1AQ9H8S9 216 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 LPAR2Q9HBW0 351 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 GPR84Q9NQS5 396 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 YAE1D1Q9NRH1 226 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 TMEM106BQ9NUM4 274 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 ACOXLQ9NUZ1 547 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 C14orf119Q9NWQ9 140 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 FAM206AQ9NX38 181 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 MRPL15Q9P015 296 aaKnown RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 ZNF319Q9P2F9 582 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 MRM2Q9UI43 246 aaKnown RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 OR52A1Q9UKL2 312 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 PCDHB10Q9UN67 800 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 RPL36Q9Y3U8 105 aaKnown RBP5.54□□□□□ -1.52
CD44-204ENST00000279452 PCDHGB1Q9Y5G3 927 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 SNX5Q9Y5X3 404 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 R4GMQ9 66 aa5.54□□□□□ -1.52
CD44-204ENST00000279452 CRYBG3Q68DQ2 2970 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms