RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MMP16P51512 607 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 MANFP55145 182 aaKnown RBP8.24□□□□□ -1.09
PDGFC-201ENST00000274071 ADAM8P78325 824 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 PSG6Q00889 435 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 MMDQ15546 238 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 DECR1Q16698 335 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 Q6ZVH6 145 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM150AQ86TG1 271 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TOMM40LQ969M1 308 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 FBXO32Q969P5 355 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM106AQ96A25 262 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TVP23CQ96ET8 276 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TECTBQ96PL2 329 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 SMDT1Q9H4I9 107 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 CMC2Q9NRP2 79 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 P2RX2Q9UBL9 471 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 FBXL17Q9UF56 701 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 IL19Q9UHD0 177 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 IGLV3-10A0A075B6K4 115 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 TRBV24-1A0A075B6N3 115 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF705FA8MVS1 300 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 PPP5D1E7EU14 171 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 NPIPA7E9PJI5 369 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 SRPX2O60687 465 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 TOMM40O96008 361 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF705DP0CH99 300 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF705BP0CI00 300 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 NPIPA8P0DM63 369 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ACRV1P26436 265 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 PBX2P40425 430 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 SOX2P48431 317 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM33P57088 247 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 FOXF1Q12946 379 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 HSPB3Q12988 150 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 LHX8Q68G74 356 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 GRINAQ7Z429 371 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 NXPE1Q8N323 547 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 OR2L13Q8N349 312 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 OR10C1Q96KK4 312 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 OR11A1Q9GZK7 315 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZMAT3Q9HA38 289 aaKnown RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 GPR35Q9HC97 309 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 COL4A4P53420 1690 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 PTPRDP23468 1912 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 TRAV8-7A0A075B6U6 113 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ANKUB1A6NFN9 424 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 TNFSF13O75888 250 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 IFNA6P05013 189 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 APOBEC3AP31941 199 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ALDH3B1P43353 468 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 RND2P52198 227 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 EFNA3P52797 238 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 VAMP2P63027 116 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 CCL20P78556 96 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF880Q6PDB4 577 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM173Q86WV6 379 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF679Q8IYX0 411 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZG16BQ96DA0 208 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 ZMYND19Q96E35 227 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 DNAJA3Q96EY1 480 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 OR8B4Q96RC9 309 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 PRRT1Q99946 306 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 WWTR1Q9GZV5 400 aa8.23□□□□□ -1.09
PDGFC-201ENST00000274071 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 RBM7Q9Y580 266 aaKnown RBP8.23□□□□□ -1.09
PDGFC-201ENST00000274071 C17orf105B2RV13 164 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 PRH1P02810 166 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR5G3P0C626 314 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 TACR2P21452 398 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CTHP32929 405 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SCAND1P57086 179 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 DUSP8Q13202 625 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 C2orf76Q3KRA6 126 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OCIAD2Q56VL3 154 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 ALG10BQ5I7T1 473 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 ZDHHC22Q8N966 263 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR4C5Q8NGB2 326 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SLC2A12Q8TD20 617 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SDSLQ96GA7 329 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CIB3Q96Q77 187 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SLC22A12Q96S37 553 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 NIPSNAP3BQ9BS92 247 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CNTD2Q9H8S5 307 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 IL26Q9NPH9 171 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SIRT3Q9NTG7 399 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SLC25A13Q9UJS0 675 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 NLRC5Q86WI3 1866 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 A0A1W2PR48 441 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 RBFOX3A6NFN3 312 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 F6UZH7 168 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SCDO00767 359 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 STK17BO94768 372 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 KAT7O95251 611 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 SRP19P09132 144 aaKnown RBP8.22□□□□□ -1.09
PDGFC-201ENST00000274071 OR2T7P0C7T2 308 aa8.22□□□□□ -1.09
PDGFC-201ENST00000274071 RPL12P30050 165 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms