RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 S100A12P80511 92 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF440Q8IYI8 595 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 OR51E1Q8TCB6 317 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 TBL1XR1Q9BZK7 514 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 EIF5A2Q9GZV4 153 aaKnown RBP11.49□□□□□ -0.57
COL8A1-202ENST00000273342 SEC61A2Q9H9S3 476 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 SOHLH2Q9NX45 425 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 LSM5Q9Y4Y9 91 aaKnown RBP11.49□□□□□ -0.57
COL8A1-202ENST00000273342 MEGF11A6BM72 1044 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 HLA-GP17693 338 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 IL12BP29460 328 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 CLINT1Q14677 625 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 AWAT1Q58HT5 328 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 FNDC7Q5VTL7 733 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 GLIPR1L1Q6UWM5 242 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 CD300LFQ8TDQ1 290 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 THAP3Q8WTV1 239 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-202ENST00000273342 GPER1Q99527 375 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 RAB33BQ9H082 229 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 TRAV36DV7A0A075B6V5 113 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 PRAMEF26H0Y7S4 382 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 RAD51DO75771 328 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 KIR2DL1P43626 348 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 OR3A4PP47883 348 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 FUT7Q11130 342 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 RSPO4Q2I0M5 234 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 PLAC9Q5JTB6 97 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 C9orf152Q5JTZ5 239 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ACER2Q5QJU3 275 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 FDX2Q6P4F2 183 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 SHISA6Q6ZSJ9 500 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 TTLL10Q6ZVT0 673 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 FAM71F1Q96KD3 344 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 FLVCR1Q9Y5Y0 555 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 TMED7-TICAM2A0A0A6YYA0 188 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 A0A0A6YYD4 124 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 DBX1A6NMT0 343 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 OR3A2P47893 321 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 DHPSP49366 369 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 SUPT4H1P63272 117 aaKnown RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ROM1Q03395 351 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ECH1Q13011 328 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ADAMTS17Q8TE56 1095 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 SLC25A43Q8WUT9 341 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 RAB3CQ96E17 227 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ARHGAP5-AS1Q96IT6 56 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 ARL5BQ96KC2 179 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 S1PR5Q9H228 398 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 SPACA1Q9HBV2 294 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
COL8A1-202ENST00000273342 PHF3Q92576 2039 aaKnown RBP11.48□□□□□ -0.57
COL8A1-202ENST00000273342 A0A1W2PPE2 198 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 C5orf52A6NGY3 159 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 CRTAPO75718 401 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 GP1BBP13224 206 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 AMY2BP19961 511 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 CX3CR1P49238 355 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 ASCL1P50553 236 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 POU3F1Q03052 451 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 PRSS54Q6PEW0 395 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 C19orf47Q8N9M1 422 aaKnown RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 PTPMT1Q8WUK0 201 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 NMES1Q9C002 83 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 SLC5A7Q9GZV3 580 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 TXNIPQ9H3M7 391 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 PCOLCE2Q9UKZ9 415 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 C7orf77A4D0Y5 90 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 H3BML4 177 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 CLPSP04118 112 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 NTSR1P30989 418 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 CYCSP99999 105 aaKnown RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 C1orf100Q5SVJ3 147 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 C1orf140Q5VVS0 124 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 TMEM151BQ8IW70 566 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 DMBX1Q8NFW5 382 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF519Q8TB69 540 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 EDARADDQ8WWZ3 215 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 THRSPQ92748 146 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF251Q9BRH9 671 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 RGCCQ9H4X1 137 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 ELL3Q9HB65 397 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-202ENST00000273342 PRODH2Q9UF12 536 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 WIF1Q9Y5W5 379 aa11.47□□□□□ -0.57
COL8A1-202ENST00000273342 A0A1W2PQF6 199 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 EIF1BO60739 113 aaKnown RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 LY86O95711 162 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 TTRP02766 147 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 HCKP08631 526 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 CTSEP14091 401 aa11.46□□□□□ -0.57
COL8A1-202ENST00000273342 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-202ENST00000273342 EIF1P41567 113 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms