RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ZNF416Q9BWM5 594 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 DUSP15Q9H1R2 295 aaPredicted RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 TAS2R5Q9NYW4 299 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 U3KQ87 197 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 SIGLEC5O15389 551 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 THBS2P35442 1172 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 EIF1P41567 113 aaKnown RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 RPS4XP62701 263 aaKnown RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 MC2RQ01718 297 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 PLXDC2Q6UX71 529 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 TMEM217Q8N7C4 229 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 RDH5Q92781 318 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 NICN1Q9BSH3 213 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 HAO2Q9NYQ3 351 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 TCRBV16S1A1N1A0A5B0 115 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 EIF5AP63241 154 aaKnown RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 ZNF362Q5T0B9 420 aaPredicted RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 ZCCHC4Q9H5U6 513 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 LUZP4Q9P127 313 aa13.03□□□□□ -0.32
CNOT9-201ENST00000273064 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
CNOT9-201ENST00000273064 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.32
CNOT9-201ENST00000273064 HS3ST1O14792 307 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 PPP3CBP16298 524 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 OR3A4PP47883 348 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 CCL11P51671 97 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 CLDN15P56746 228 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 THEM4Q5T1C6 240 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 CPT1CQ8TCG5 803 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 CA10Q9NS85 328 aa13.02□□□□□ -0.32
CNOT9-201ENST00000273064 MN1Q10571 1320 aaPredicted RBP13.02□□□□□ -0.32
CNOT9-201ENST00000273064 A0A0B4J293 547 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 DHHO43323 396 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 POU2F2P09086 479 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 RRASP10301 218 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 PVALBP20472 110 aaPredicted RBP13.02□□□□□ -0.33
CNOT9-201ENST00000273064 EGR4Q05215 589 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 ZBTB37Q5TC79 503 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 CADM4Q8NFZ8 388 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 MCHR2Q969V1 340 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 SLC25A21Q9BQT8 299 aaPredicted RBP13.02□□□□□ -0.33
CNOT9-201ENST00000273064 PIGQQ9BRB3 760 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 MTFP1Q9UDX5 166 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 TOR1AO14656 332 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 ADRA2CP18825 462 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 CAMLGP49069 296 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 RHBDD2Q6NTF9 364 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 RBPMSQ93062 196 aaKnown RBP13.02□□□□□ -0.33
CNOT9-201ENST00000273064 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.33
CNOT9-201ENST00000273064 METTL9Q9H1A3 318 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 LANCL2Q9NS86 450 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 CDH23Q9H251 3354 aa13.02□□□□□ -0.33
CNOT9-201ENST00000273064 SPG11Q96JI7 2443 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 KRBOX4Q5JUW0 171 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 RABL2AQ9UBK7 228 aaPredicted RBP13.01□□□□□ -0.33
CNOT9-201ENST00000273064 RABL2BQ9UNT1 228 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 PIEZO2Q9H5I5 2752 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 ANKUB1A6NFN9 424 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 PMS2P2O95744 297 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 CCL3P10147 92 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 MGMTP16455 207 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 EPHA8P29322 1005 aaPredicted RBP13.01□□□□□ -0.33
CNOT9-201ENST00000273064 CD96P40200 585 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 ASCL1P50553 236 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 TOR2AQ5JU69 321 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 CLVS2Q5SYC1 327 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 STX12Q86Y82 276 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 ZNF695Q8IW36 515 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 ASB5Q8WWX0 329 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 MRGPRX4Q96LA9 322 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 NPAS1Q99742 590 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 SDHAF2Q9NX18 166 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 XRCC2O43543 280 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 PRKACBP22694 351 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 CPT2P23786 658 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 KIR3DL2P43630 455 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 C3AR1Q16581 482 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 NAA40Q86UY6 237 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 NKAIN3Q8N8D7 197 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 PLPPR2Q96GM1 343 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 OXGR1Q96P68 337 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 ZNF2Q9BSG1 426 aaPredicted RBP13.01□□□□□ -0.33
CNOT9-201ENST00000273064 SUCNR1Q9BXA5 334 aa13.01□□□□□ -0.33
CNOT9-201ENST00000273064 A0A1B0GUH1 482 aa13□□□□□ -0.33
CNOT9-201ENST00000273064 ADH6P28332 368 aa13□□□□□ -0.33
CNOT9-201ENST00000273064 GALNSP34059 522 aa13□□□□□ -0.33
CNOT9-201ENST00000273064 PPT1P50897 306 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms