RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 ATF4P18848 351 aaPredicted RBP14.7□□□□□ -0.06
VPS54-201ENST00000272322 GABRR1P24046 479 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 WNT2BQ93097 391 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 PLEK2Q9NYT0 353 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 NUP210LQ5VU65 1888 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 MPTX1A8MV57 137 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 ADAP1O75689 374 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 NMBP08949 121 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 RRASP10301 218 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 MMP16P51512 607 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 TMEM65Q6PI78 240 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 SLC22A24Q8N4F4 322 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 OR2M3Q8NG83 312 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 OR4K15Q8NH41 348 aa14.7□□□□□ -0.06
VPS54-201ENST00000272322 PGA4P0DJD7 388 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 PGA3P0DJD8 388 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 BHLHE23Q8NDY6 225 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 NOXO1Q8NFA2 376 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 SLC22A8Q8TCC7 542 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 ZNF581Q9P0T4 197 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 LY6G6EA0A0G2JKS1 128 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 KLK3P07288 261 aaPredicted RBP14.69□□□□□ -0.06
VPS54-201ENST00000272322 SNU13P55769 128 aaKnown RBP14.69□□□□□ -0.06
VPS54-201ENST00000272322 MFSD13AQ14CX5 517 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 SMUG1Q53HV7 270 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 CCDC107Q8WV48 283 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 CHRNA10Q9GZZ6 450 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 OR2S2Q9NQN1 319 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 PTTG3PQ9NZH4 202 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 UPB1Q9UBR1 384 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 U3KQA8 63 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 ICE1Q9Y2F5 2266 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 ADAMTS9Q9P2N4 1935 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 TRAV14DV4A0A0A6YYC5 116 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 DISC1C4P0D8 188 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 ZNF878C9JN71 531 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 ZNF735P0CB33 412 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 PTGS2P35354 604 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 ZNF260Q3ZCT1 412 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 NHLRC3Q5JS37 347 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 PLAC9Q5JTB6 97 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 MISPQ8IVT2 679 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 OR51T1Q8NGJ9 327 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 NUBPLQ8TB37 319 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 RAB3CQ96E17 227 aa14.69□□□□□ -0.06
VPS54-201ENST00000272322 HDHD3Q9BSH5 251 aaPredicted RBP14.69□□□□□ -0.06
VPS54-201ENST00000272322 TRAF4Q9BUZ4 470 aaPredicted RBP14.69□□□□□ -0.06
VPS54-201ENST00000272322 A0A0A6YYD4 124 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 A0A1B0GTI1 187 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 ITGB2P05107 769 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 GABRA1P14867 456 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 STARD6P59095 220 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 TMEM200AQ86VY9 491 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 SAP25Q8TEE9 199 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 MRGPRX4Q96LA9 322 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 ALKBH3Q96Q83 286 aaPredicted RBP14.68□□□□□ -0.06
VPS54-201ENST00000272322 TMPRSS13Q9BYE2 586 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 RAB22AQ9UL26 194 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 A0A0G2JMM0 328 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 A0A1W2PPB8 328 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 A0A1W2PRS3 328 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 KIR3DP1A8MWS1 328 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 NPIPA2E9PIF3 369 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 NPIPA3F8WFD2 350 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 RAD51DO75771 328 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 PGAM2P15259 253 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 THEM4Q5T1C6 240 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 TMEM59Q9BXS4 323 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 MRPL13Q9BYD1 178 aaKnown RBP14.68□□□□□ -0.06
VPS54-201ENST00000272322 GPR160Q9UJ42 338 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 DKKL1Q9UK85 242 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 CEP192Q8TEP8 1941 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 F5H0A9 414 aaPredicted RBP14.68□□□□□ -0.06
VPS54-201ENST00000272322 CCNOP22674 350 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 SRYQ05066 204 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 ZNF660Q6AZW8 331 aaPredicted RBP14.68□□□□□ -0.06
VPS54-201ENST00000272322 MED30Q96HR3 178 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 VRK1Q99986 396 aaPredicted RBP14.68□□□□□ -0.06
VPS54-201ENST00000272322 WNT16Q9UBV4 365 aa14.68□□□□□ -0.06
VPS54-201ENST00000272322 FAM230AA0A1W2PPH8 454 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 FCGR2AP12318 317 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 CSNK1A1P48729 337 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 TMEM229BQ8NBD8 167 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 DYRK2Q92630 601 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 hCG_1807616A0A1W2PRN6 198 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 ZNF208O43345 1280 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 PMS2P2O95744 297 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 HOXB5P09067 269 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 DEFA5Q01523 94 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 OR10R2Q8NGX6 335 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 MRGPRFQ96AM1 343 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 CHCHD2Q9Y6H1 151 aaPredicted RBP14.67□□□□□ -0.06
VPS54-201ENST00000272322 CACNA1DQ01668 2161 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 SSX5O60225 188 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 NAGAP17050 411 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 BLVRBP30043 206 aaPredicted RBP14.67□□□□□ -0.06
VPS54-201ENST00000272322 DLSTP36957 453 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 MICBQ29980 383 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 KMT5CQ86Y97 462 aa14.67□□□□□ -0.06
VPS54-201ENST00000272322 S100A13Q99584 98 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms