RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TRAF3IP2O43734 574 aaPredicted RBP11.02□□□□□ -0.65
BEST3-201ENST00000266661 ONECUT2O95948 504 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 LIPCP11150 499 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 GNB3P16520 340 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 CCL1P22362 96 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 MSX1P28360 303 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 NBL1P41271 181 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 MFAP5Q13361 173 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 KCNMB1Q16558 191 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 HIST3H3Q16695 136 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 LYSMD4Q5XG99 296 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 ZNF574Q6ZN55 896 aaPredicted RBP11.02□□□□□ -0.65
BEST3-201ENST00000266661 ASCL5Q7RTU5 278 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 OR2W3Q7Z3T1 314 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 RABEPKQ7Z6M1 372 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 OR5D14Q8NGL3 314 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 SEC22AQ96IW7 307 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 VRK1Q99986 396 aaPredicted RBP11.02□□□□□ -0.65
BEST3-201ENST00000266661 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 ZNF319Q9P2F9 582 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 SRPK3Q9UPE1 567 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 VDAC3Q9Y277 283 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 ASCC3Q8N3C0 2202 aaKnown RBP11.01□□□□□ -0.65
BEST3-201ENST00000266661 VSTM2BA6NLU5 285 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 DUS4LO95620 317 aaKnown RBP11.01□□□□□ -0.65
BEST3-201ENST00000266661 CSN2P05814 226 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 ERCC1P07992 297 aaPredicted RBP11.01□□□□□ -0.65
BEST3-201ENST00000266661 CHRM2P08172 466 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 RAB3AP20336 220 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 HRH1P35367 487 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 MYBPHQ13203 477 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 PLAC9Q5JTB6 97 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 FAM74A1Q5RGS3 127 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 LIN54Q6MZP7 749 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 CRIP3Q6Q6R5 217 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 KLHL24Q6TFL4 600 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 ATRAIDQ6UW56 229 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 ANGPTL5Q86XS5 388 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 OR13C9Q8NGT0 318 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 OR2I1PQ8NGU4 316 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 DNASE2BQ8WZ79 361 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 NKD1Q969G9 470 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 FBXW5Q969U6 566 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 ZNF75AQ96N20 296 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 NICN1Q9BSH3 213 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 SOX7Q9BT81 388 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 SELENOIQ9C0D9 397 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 TMEM185BQ9H7F4 350 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 MOB1AQ9H8S9 216 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 PILRBQ9UKJ0 227 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 ASXL3Q9C0F0 2248 aa11.01□□□□□ -0.65
BEST3-201ENST00000266661 ZNF814B7Z6K7 855 aa11□□□□□ -0.65
BEST3-201ENST00000266661 F8VVB4 439 aa11□□□□□ -0.65
BEST3-201ENST00000266661 F8VWA3 439 aa11□□□□□ -0.65
BEST3-201ENST00000266661 GP1BAP07359 652 aa11□□□□□ -0.65
BEST3-201ENST00000266661 CTRB1P17538 263 aa11□□□□□ -0.65
BEST3-201ENST00000266661 GNALP38405 381 aa11□□□□□ -0.65
BEST3-201ENST00000266661 LUMP51884 338 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 TMEM50BP56557 158 aa11□□□□□ -0.65
BEST3-201ENST00000266661 SPEM2Q0P670 501 aa11□□□□□ -0.65
BEST3-201ENST00000266661 SHBQ15464 509 aa11□□□□□ -0.65
BEST3-201ENST00000266661 TAF13Q15543 124 aa11□□□□□ -0.65
BEST3-201ENST00000266661 VAX1Q5SQQ9 334 aa11□□□□□ -0.65
BEST3-201ENST00000266661 ZNF385CQ66K41 422 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
BEST3-201ENST00000266661 CHST4Q8NCG5 386 aa11□□□□□ -0.65
BEST3-201ENST00000266661 NOXO1Q8NFA2 376 aa11□□□□□ -0.65
BEST3-201ENST00000266661 OR10H5Q8NGA6 315 aa11□□□□□ -0.65
BEST3-201ENST00000266661 OR10K1Q8NGX5 313 aa11□□□□□ -0.65
BEST3-201ENST00000266661 OR51E1Q8TCB6 317 aa11□□□□□ -0.65
BEST3-201ENST00000266661 THAP3Q8WTV1 239 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 C5orf34Q96MH7 638 aa11□□□□□ -0.65
BEST3-201ENST00000266661 GVINP1Q7Z2Y8 2422 aa11□□□□□ -0.65
BEST3-201ENST00000266661 KANTRA0A1W2PQU2 76 aa11□□□□□ -0.65
BEST3-201ENST00000266661 ZNF878C9JN71 531 aa11□□□□□ -0.65
BEST3-201ENST00000266661 H3BML4 177 aa11□□□□□ -0.65
BEST3-201ENST00000266661 DNASE2O00115 360 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 TOX3O15405 576 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 TIAF1O95411 115 aa11□□□□□ -0.65
BEST3-201ENST00000266661 IGLV3-1P01715 115 aa11□□□□□ -0.65
BEST3-201ENST00000266661 GSTP1P09211 210 aaKnown RBP11□□□□□ -0.65
BEST3-201ENST00000266661 ZNF93P35789 620 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 EIF1AXP47813 144 aaKnown RBP11□□□□□ -0.65
BEST3-201ENST00000266661 IL13RA1P78552 427 aa11□□□□□ -0.65
BEST3-201ENST00000266661 INPP5JQ15735 1006 aaPredicted RBP11□□□□□ -0.65
BEST3-201ENST00000266661 NKAIN1Q4KMZ8 207 aa11□□□□□ -0.65
BEST3-201ENST00000266661 TMEM104Q8NE00 496 aa11□□□□□ -0.65
BEST3-201ENST00000266661 OR8B12Q8NGG6 310 aa11□□□□□ -0.65
BEST3-201ENST00000266661 PMEPA1Q969W9 287 aa11□□□□□ -0.65
BEST3-201ENST00000266661 TMEM230Q96A57 120 aa11□□□□□ -0.65
BEST3-201ENST00000266661 CYYR1Q96J86 154 aa11□□□□□ -0.65
BEST3-201ENST00000266661 PHB2Q99623 299 aa11□□□□□ -0.65
BEST3-201ENST00000266661 RNF126Q9BV68 326 aa11□□□□□ -0.65
BEST3-201ENST00000266661 GPR132Q9UNW8 380 aa11□□□□□ -0.65
BEST3-201ENST00000266661 PHF3Q92576 2039 aaKnown RBP10.99□□□□□ -0.65
BEST3-201ENST00000266661 TRBV11-1A0A0K0K1C0 115 aa10.99□□□□□ -0.65
BEST3-201ENST00000266661 LOC102725191A0A1B0GVB3 256 aa10.99□□□□□ -0.65
BEST3-201ENST00000266661 FOXI3A8MTJ6 420 aaPredicted RBP10.99□□□□□ -0.65
BEST3-201ENST00000266661 TSPAN4O14817 238 aa10.99□□□□□ -0.65
BEST3-201ENST00000266661 SMAD9O15198 467 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms