RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 EIF2S3P41091 472 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF84P51523 738 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 PRSS53Q2L4Q9 553 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 CCNL2Q96S94 520 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC25A31Q9H0C2 315 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 IGHEP01854 428 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 ITGB2P05107 769 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 ADRA2AP08913 450 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 CD37P11049 281 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TBPP20226 339 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TBXA2RP21731 343 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 RFC3P40938 356 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 CLINT1Q14677 625 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 ABHD17BQ5VST6 288 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF660Q6AZW8 331 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 PRSS35Q8N3Z0 413 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 OR5T1Q8NG75 326 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 IFI44Q8TCB0 444 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 OR6C1Q96RD1 312 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 NMNAT2Q9BZQ4 307 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 NRSN2Q9GZP1 204 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 OR10A2Q9H208 303 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC17A5Q9NRA2 495 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 RASL12Q9NYN1 266 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 A0A087WZY1 265 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 PRR19A6NJB7 356 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 HCRTR1O43613 425 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 SNU13P55769 128 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 PPIAP62937 165 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 BTG2P78543 158 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 ACKR1Q16570 336 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 PLPP5Q8NEB5 264 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 LFNGQ8NES3 379 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 NUDT22Q9BRQ3 303 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 UQCC1Q9NVA1 299 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 A0A087WUJ7 227 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TMED7-TICAM2A0A0A6YYA0 188 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 SDCBPO00560 298 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TNFSF12O43508 249 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TMEM128Q5BJH2 165 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 OR52W1Q6IF63 320 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 OR1J1Q8NGS3 322 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM86C1Q9NVL1 165 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 TMED7Q9Y3B3 224 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 MUC6Q6W4X9 2439 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 IGHV5-51A0A0C4DH38 117 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 GP1BAP07359 652 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 GNB3P16520 340 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 CCNOP22674 350 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 GALNSP34059 522 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 KCNJ3P48549 501 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 POLR2HP52434 150 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 EEF1A1P68104 462 aaKnown RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 INPP5JQ15735 1006 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 WDR38Q5JTN6 314 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM69BQ5VUD6 431 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM57BQ71RH2 274 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 OR6S1Q8NH40 331 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 BORCS8Q96FH0 119 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 KIRREL1Q96J84 757 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 LCORQ96JN0 433 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 C4orf45Q96LM5 186 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 C2orf50Q96LR7 162 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM60AQ9NP50 221 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 ST6GALNAC2Q9UJ37 374 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 CES1P1Q9UKY3 287 aa10.36□□□□□ -0.75
CLSTN3-201ENST00000266546 CRYBA1P05813 215 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 SMIM10L1P0DMW3 83 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 SPP1P10451 314 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 VWA2Q5GFL6 755 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 ZDHHC22Q8N966 263 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 OIT3Q8WWZ8 545 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 SMIM10Q96HG1 83 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF251Q9BRH9 671 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 EDEM2Q9BV94 578 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 MRPS2Q9Y399 296 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 VSTM5A8MXK1 200 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 MECP2P51608 486 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 NKAIN1Q4KMZ8 207 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 DCAF12L2Q5VW00 463 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 LILRB2Q8N423 598 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 D2HGDHQ8N465 521 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 OR4N2Q8NGD1 307 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 GUCD1Q96NT3 240 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 SPACA5Q96QH8 159 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 PRO3102Q9H379 93 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 PRAMEF27A3QJZ7 478 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 OR6C76A6NM76 312 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 ADAM10O14672 748 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 MT-ATP6P00846 226 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 SFTPDP35247 375 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 SPEM2Q0P670 501 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF266Q14584 549 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 BCORP1Q8N888 145 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 OR4D6Q8NGJ1 314 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms