RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SHISA7A6NL88 538 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 MASP2O00187 686 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 CD74P04233 296 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 CLDN6P56747 220 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 FGL1Q08830 312 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 HDHD3Q9BSH5 251 aaPredicted RBP14.9□□□□□ -0.02
SQLE-201ENST00000265896 RNF126Q9BV68 326 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 C5orf66Q9H5L9 145 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 NCOA6Q14686 2063 aaPredicted RBP14.89□□□□□ -0.03
SQLE-201ENST00000265896 IGHV3-15A0A0B4J1V0 119 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 TMEM218A2RU14 115 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 OR2F2O95006 317 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 OR2F1Q13607 317 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 FDX2Q6P4F2 183 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 OR1N1Q8NGS0 311 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 ZNF701Q9NV72 531 aaPredicted RBP14.89□□□□□ -0.03
SQLE-201ENST00000265896 RAB22AQ9UL26 194 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 IGKV3D-11A0A0A0MRZ8 115 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 F5H5K5 113 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 SCGB1D2O95969 90 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 CRHP06850 196 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 SLC6A9P48067 706 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 ANKRD55Q3KP44 614 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 LRRC18Q8N456 261 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 MRPL38Q96DV4 380 aaKnown RBP14.89□□□□□ -0.03
SQLE-201ENST00000265896 EDEM2Q9BV94 578 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 FBRSQ9HAH7 460 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 FAM206AQ9NX38 181 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 CA14Q9ULX7 337 aa14.89□□□□□ -0.03
SQLE-201ENST00000265896 MRPS28Q9Y2Q9 187 aaKnown RBP14.89□□□□□ -0.03
SQLE-201ENST00000265896 FTCDNL1E5RQL4 147 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 TIAF1O95411 115 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 MT-ATP6P00846 226 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 RAB3AP20336 220 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 SERPINA2P20848 420 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 KCNJ3P48549 501 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 TMEM50BP56557 158 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 RAB32Q13637 225 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 PDCD1Q15116 288 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 TMEM244Q5VVB8 128 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 CLEC18BQ6UXF7 455 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 OR4A4PQ8NGN8 299 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 RAB3CQ96E17 227 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 OR5B2Q96R09 309 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 AKIRIN1Q9H9L7 192 aaPredicted RBP14.88□□□□□ -0.03
SQLE-201ENST00000265896 ADAM10O14672 748 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 CD38P28907 300 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 LTBRP36941 435 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 ZNF121P58317 390 aaPredicted RBP14.88□□□□□ -0.03
SQLE-201ENST00000265896 RNF4P78317 190 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 H1FNTQ75WM6 255 aaPredicted RBP14.88□□□□□ -0.03
SQLE-201ENST00000265896 FGF21Q9NSA1 209 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 RHBDD3Q9Y3P4 386 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 FAM221AA4D161 298 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 H7C2Y5 167 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 SLC33A1O00400 549 aaPredicted RBP14.88□□□□□ -0.03
SQLE-201ENST00000265896 PVALBP20472 110 aaPredicted RBP14.88□□□□□ -0.03
SQLE-201ENST00000265896 CHAF1BQ13112 559 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 C20orf196Q8IYI0 205 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 TSTD1Q8NFU3 115 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 SLC39A7Q92504 469 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 TMEM230Q96A57 120 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 PIK3IP1Q96FE7 263 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 LPAR5Q9H1C0 372 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 SCPEP1Q9HB40 452 aa14.88□□□□□ -0.03
SQLE-201ENST00000265896 A0A1B0GTQ1 180 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 SPINK2P20155 84 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 FASLGP48023 281 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 MYBPHQ13203 477 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 OR2A2Q6IF42 318 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 SLC22A24Q8N4F4 322 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 PIGTQ969N2 578 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 KCNK17Q96T54 332 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 SERINC1Q9NRX5 453 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 SLC22A11Q9NSA0 550 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 AMY2BP19961 511 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 PNLIPRP2P54317 469 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 CLRN1P58418 232 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 MEF2DQ14814 521 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 RPL7L1Q6DKI1 246 aaKnown RBP14.87□□□□□ -0.03
SQLE-201ENST00000265896 PGAP1Q75T13 922 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 OR8B12Q8NGG6 310 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 OR5D14Q8NGL3 314 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 DYRK2Q92630 601 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 C20orf24Q9BUV8 137 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 DNTTIP1Q9H147 329 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 SLC17A5Q9NRA2 495 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 LHFPL6Q9Y693 200 aa14.87□□□□□ -0.03
SQLE-201ENST00000265896 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 LRP3O75074 770 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 LRP4O75096 1905 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 SCAND1P57086 179 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 SP6Q3SY56 376 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 C1orf100Q5SVJ3 147 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 GKN2Q86XP6 184 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 ZNF283Q8N7M2 679 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 OR10G3Q8NGC4 313 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 STT3BQ8TCJ2 826 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 ZDHHC12Q96GR4 267 aa14.86□□□□□ -0.03
SQLE-201ENST00000265896 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms