RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LALBAP00709 142 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 SDHBP21912 280 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 DTYMKP23919 212 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 RPL34P49207 117 aaKnown RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 PRR27Q6MZM9 219 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR1J1Q8NGS3 322 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 SMIM19Q96E16 107 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 MYO5AQ9Y4I1 1855 aaKnown RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 LAMB2P55268 1798 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 SBK3P0C264 359 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 METTL15P1P0C7V9 234 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 CDK5R1Q15078 307 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 WIPI1Q5MNZ9 446 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 RGS7BPQ6MZT1 257 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR2V1Q8NHB1 315 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 SLC25A19Q9HC21 320 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 NDRG3Q9UGV2 375 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 A0A087WZY1 265 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 TEX51A0A1B0GUA7 166 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR6C68A6NDL8 312 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ATP6V1G2-DDX39BF2Z307 99 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR4E1P0C645 316 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 NTF3P20783 257 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 DCTDP32321 178 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 PNLIPRP2P54317 469 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ASAH1Q13510 395 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR1C1Q15619 314 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 MPPED2Q15777 294 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF239Q16600 458 aaKnown RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 PXDC1Q5TGL8 231 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ADAM5Q6NVV9 412 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 HIST2H3AQ71DI3 136 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 TSEN54Q7Z6J9 526 aaKnown RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR10AD1Q8NGE0 317 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR10P1Q8NGE3 313 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ST8SIA2Q92186 375 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 FBXO17Q96EF6 278 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 CDCA4Q9BXL8 241 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ANKUB1A6NFN9 424 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 RAF1P04049 648 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 CT45A10P0DMU9 189 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 GABRG2P18507 467 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 PTBP1P26599 531 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FAM96BQ9Y3D0 163 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 IFITM5A6NNB3 132 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 PPM1DO15297 605 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 GNG10P50151 68 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 PMP22Q01453 160 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FAM27D1Q5T7N8 215 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 Q6ZNX1 250 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 NT5CQ8TCD5 201 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 KISS1RQ969F8 398 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF835Q9Y2P0 537 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 RREB1Q92766 1687 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ECM29Q5VYK3 1845 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ANKRD12Q6UB98 2062 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FIGNL2A6NMB9 653 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ANGPTL7O43827 346 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ICMTO60725 284 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 TOX4O94842 621 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 OR2F2O95006 317 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 GABRB1P18505 474 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 C17orf107Q6ZR85 190 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FAM122BQ7Z309 247 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 OSR2Q8N2R0 312 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ERGIC1Q969X5 290 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 IL21Q9HBE4 155 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 B9D1Q9UPM9 204 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 MARF1Q9Y4F3 1742 aaKnown RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 H3BMH7 237 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 TERTO14746 1132 aaKnown RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FGF7P21781 194 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 EPHA2P29317 976 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 CEACAM16Q2WEN9 425 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 GUSBP11Q6P575 273 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 DRAM2Q6UX65 266 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 LSRQ86X29 649 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FAM122AQ96E09 287 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 S1PR3Q99500 378 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 FBXL4Q9UKA2 621 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 NCBP2LA6PVI3 153 aaKnown RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 MGMTP16455 207 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 POU3F3P20264 500 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-201ENST00000261037 CD80P33681 288 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 BTNL8Q6UX41 500 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 ZNRF4Q8WWF5 429 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 DERL3Q96Q80 235 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 TAAR6Q96RI8 345 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 COMMD5Q9GZQ3 224 aa10.91□□□□□ -0.66
COL8A1-201ENST00000261037 TRBV5-4A0A0C4DH59 114 aa10.9□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF354AO60765 605 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-201ENST00000261037 SPNP16150 400 aa10.9□□□□□ -0.66
COL8A1-201ENST00000261037 FCER1GP30273 86 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms