RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ANKRD16Q6P6B7 361 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 FAM181AQ8N9Y4 354 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 OR5M8Q8NGP6 311 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 LMF2Q9BU23 707 aaKnown RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 PPIL1Q9Y3C6 166 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 FRYLO94915 3013 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 C9orf170A2RU37 121 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 CDRT15L2A8MXV6 281 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 MMP7P09237 267 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 RNF224P0DH78 156 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 LAP3P28838 519 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 ELLP55199 621 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 SLC37A1P57057 533 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 TMPRSS11FQ6ZWK6 438 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 SFTPA2Q8IWL1 248 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 CFHR5Q9BXR6 569 aa13.36□□□□□ -0.27
KCTD3-201ENST00000259154 THAP10Q9P2Z0 257 aaPredicted RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 RCL1Q9Y2P8 373 aaKnown RBP13.36□□□□□ -0.27
KCTD3-201ENST00000259154 VSTM2BA6NLU5 285 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 THBS1P07996 1170 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 CPN1P15169 458 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 RPS16P62249 146 aaKnown RBP13.35□□□□□ -0.27
KCTD3-201ENST00000259154 MLF2Q15773 248 aaPredicted RBP13.35□□□□□ -0.27
KCTD3-201ENST00000259154 OR5AP2Q8NGF4 316 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 PHYHIPQ92561 330 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF251Q9BRH9 671 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ST6GALNAC2Q9UJ37 374 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 CA14Q9ULX7 337 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 WASF3Q9UPY6 502 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 DNASE2O00115 360 aaPredicted RBP13.35□□□□□ -0.27
KCTD3-201ENST00000259154 PPP1CAP62136 330 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 C16orf47Q6ZP98 133 aaPredicted RBP13.35□□□□□ -0.27
KCTD3-201ENST00000259154 RNF165Q6ZSG1 346 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF611Q8N823 705 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF383Q8NA42 475 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 NMNAT2Q9BZQ4 307 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 PIPOXQ9P0Z9 390 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ENTPD2Q9Y5L3 495 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 LRRK1Q38SD2 2015 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 SHANK1Q9Y566 2161 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF727A8MUV8 499 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ANGPTL7O43827 346 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ICOSLGO75144 302 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 CD53P19397 219 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 SLC17A1Q14916 467 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 SLC22A24Q8N4F4 322 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 RAB22AQ9UL26 194 aa13.35□□□□□ -0.27
KCTD3-201ENST00000259154 ARHGEF17Q96PE2 2063 aaPredicted RBP13.35□□□□□ -0.27
KCTD3-201ENST00000259154 EPPINO95925 133 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 BMP5P22003 454 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 THBS2P35442 1172 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 MTCP1P56278 107 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 SRSF3P84103 164 aaKnown RBP13.34□□□□□ -0.27
KCTD3-201ENST00000259154 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 PLXDC2Q6UX71 529 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 UBL7Q96S82 380 aaPredicted RBP13.34□□□□□ -0.27
KCTD3-201ENST00000259154 PPP4R1LQ9P1A2 415 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 SLC22A7Q9Y694 548 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 CEBPZOSA8MTT3 80 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 HPP00738 406 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 FGF2P09038 288 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
KCTD3-201ENST00000259154 TMEM234Q8WY98 164 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 C1orf123Q9NWV4 160 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 A0A0B4J2E0 115 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 A0A1B0GX12 115 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 NDUFS6O75380 124 aaKnown RBP13.34□□□□□ -0.27
KCTD3-201ENST00000259154 FOLR1P15328 257 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 CDAP32320 146 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 MOGAT2Q3SYC2 334 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 RAET1LQ5VY80 246 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 LPCAT3Q6P1A2 487 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 OR52N4Q8NGI2 321 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 EPHX3Q9H6B9 360 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 LHX6Q9UPM6 363 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 ZDBF2Q9HCK1 2354 aa13.34□□□□□ -0.27
KCTD3-201ENST00000259154 MEX3AA1L020 520 aaKnown RBP13.33□□□□□ -0.27
KCTD3-201ENST00000259154 NPIPB8E9PQR5 432 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 HNF1AP20823 631 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 DPP4P27487 766 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 CCINQ13939 588 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 SGCBQ16585 318 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 UBALD1Q8TB05 177 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 C4orf45Q96LM5 186 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 HIST1H2AAQ96QV6 131 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 AMELYQ99218 206 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 SYT3Q9BQG1 590 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 PDE7BQ9NP56 450 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 FBXL17Q9UF56 701 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 ACAD8Q9UKU7 415 aa13.33□□□□□ -0.27
KCTD3-201ENST00000259154 ZNF106Q9H2Y7 1883 aaKnown RBP13.33□□□□□ -0.28
KCTD3-201ENST00000259154 BRINP1O60477 761 aa13.33□□□□□ -0.28
KCTD3-201ENST00000259154 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
KCTD3-201ENST00000259154 FAM53BQ14153 422 aa13.33□□□□□ -0.28
KCTD3-201ENST00000259154 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
KCTD3-201ENST00000259154 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
KCTD3-201ENST00000259154 BCORP1Q8N888 145 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms