RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 BRICD5Q6PL45 260 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OR11G2Q8NGC1 345 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OR1S2Q8NGQ3 325 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OTOSQ8NHW6 89 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 NICN1Q9BSH3 213 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SLC25A32Q9H2D1 315 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FAM74A7A6NL05 159 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF705GA8MUZ8 300 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 RD3LP0DJH9 198 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CHATP28329 748 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CSF2RBP32927 897 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 AFF3P51826 1226 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TUSC1Q2TAM9 212 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FAM74A3Q4VXF1 159 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PRSS42Q7Z5A4 293 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ADGRG3Q86Y34 549 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 STT3BQ8TCJ2 826 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 C10orf90Q96M02 699 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 S1PR5Q9H228 398 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 C1orf123Q9NWV4 160 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 KCNAB3O43448 404 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 LMX1BO60663 402 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 MPC2O95563 127 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ADRA2CP18825 462 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 NKX6-1P78426 367 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PCK2Q16822 640 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 C9orf50Q5SZB4 431 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FAM109BQ6ICB4 259 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SPICQ8N5J4 248 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FAM181AQ8N9Y4 354 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 RRNAD1Q96FB5 475 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF286AQ9HBT8 521 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 KCNIP1Q9NZI2 227 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ZMIZ1Q9ULJ6 1067 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PCDHGA5Q9Y5G8 931 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 IGHV5-51A0A0C4DH38 117 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CD300LBA8K4G0 201 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PTP4A3O75365 173 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 THY1P04216 161 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FOXF1Q12946 379 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PPP1R1AQ13522 171 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TAF9Q16594 264 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL21Q7Z2W9 205 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OR6C1Q96RD1 312 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CTSFQ9UBX1 484 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OPN4Q9UHM6 478 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TXNDC12O95881 172 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 IFNA1P01562 189 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SERPINE2P07093 398 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 RIN1Q13671 783 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 HMGN3Q15651 99 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SLC25A38Q96DW6 304 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SHDQ96IW2 340 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 MMP25Q9NPA2 562 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FAM212BQ9NTI7 297 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OBP2AQ9NY56 170 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PRELID3BQ9Y3B1 194 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 NAT1P18440 290 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 RNF4P78317 190 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FZD2Q14332 565 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 MKXQ8IYA7 352 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 GVQW1Q8N7I0 195 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ST8SIA1Q92185 356 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PISDQ9UG56 409 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SRPK3Q9UPE1 567 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 MED13Q9UHV7 2174 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 C17orf51A8MQB3 221 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 HSD17B6O14756 317 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CTDSPLO15194 276 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 BCAT2O15382 392 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PIN1P1O15428 100 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SOCS1O15524 211 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CPT2P23786 658 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CD27P26842 260 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TAGLN2P37802 199 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 KIAA0141Q14154 515 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 C19orf48Q6RUI8 117 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CDC20BQ86Y33 519 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 BAP18Q8IXM2 172 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ZDHHC22Q8N966 263 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SLC30A7Q8NEW0 376 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OR51A2Q8NGJ7 313 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TTC9Q92623 222 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TCEAL3Q969E4 200 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 LDAHQ9H6V9 325 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TAF9BQ9HBM6 251 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SLC22A11Q9NSA0 550 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FBXO7Q9Y3I1 522 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 NSG1A0A0A6YYJ2 146 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SCRG1O75711 98 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 GLAP06280 429 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 GAS1P54826 345 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 GPR85P60893 370 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ARL6IP1Q15041 203 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TOMM34Q15785 309 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PAN3Q58A45 887 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 RPL7L1Q6DKI1 246 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM65Q6PI78 240 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CLEC9AQ6UXN8 241 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms