RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ASB13Q8WXK3 278 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 JSRP1Q96MG2 331 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 IER2Q9BTL4 223 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 KIF25Q9UIL4 384 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 RTTNQ86VV8 2226 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 IGKV1-9A0A0C4DH69 117 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 TUBAL3A6NHL2 446 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 RFPL4AA6NLU0 287 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 RFPL4AL1F8VTS6 287 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 YKT6O15498 198 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 CASRP41180 1078 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 GSK3AP49840 483 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 GMFBP60983 142 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 PLAC9Q5JTB6 97 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 CLVS2Q5SYC1 327 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 RFPL4BQ6ZWI9 263 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 M1APQ8TC57 530 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 NTNG2Q96CW9 530 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 NUDT16L1Q9BRJ7 211 aaKnown RBP17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 CST11Q9H112 138 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 BANF2Q9H503 90 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 SH2D2AQ9NP31 389 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 IFT46Q9NQC8 304 aa17.22■□□□□ 0.35
CDC42EP1-201ENST00000249014 MPIG6BO95866 241 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 WDPCPO95876 746 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 CD63P08962 238 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 CD34P28906 385 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 CSNK1A1P48729 337 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 SSR4P51571 173 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 GRB2P62993 217 aaKnown RBP17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 DOK3Q7L591 496 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 SLC25A42Q86VD7 318 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 DTX1Q86Y01 620 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 OR5M8Q8NGP6 311 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 OR14K1Q8NGZ2 314 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 PAQR8Q8TEZ7 354 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 LYZL4Q96KX0 146 aa17.21■□□□□ 0.35
CDC42EP1-201ENST00000249014 OR2AT4A6NND4 320 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 C9J4A7 227 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 SOCS1O15524 211 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 CDC14BO60729 498 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 B3GALNT1O75752 331 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 SCGNO76038 276 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 STK17BO94768 372 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 HCKP08631 526 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 RPA2P15927 270 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZBTB25P24278 435 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 DSCR4P56555 118 aaPredicted RBP17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 LSM6P62312 80 aaKnown RBP17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 PPP1R1AQ13522 171 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 ENDOGQ14249 297 aaKnown RBP17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF468Q5VIY5 522 aaPredicted RBP17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 GSG1LQ6UXU4 331 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR2W3Q7Z3T1 314 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 DTWD2Q8NBA8 298 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR2Y1Q8NGV0 311 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 SSC4DQ8WTU2 575 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM54Q969K7 222 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 MFFQ9GZY8 342 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 NARFLQ9H6Q4 476 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF160Q9HCG1 818 aa17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 NOP16Q9Y3C1 178 aaKnown RBP17.21■□□□□ 0.34
CDC42EP1-201ENST00000249014 CCSO14618 274 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 MSR1P21757 451 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 CTSSP25774 331 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 MC2RQ01718 297 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 C10orf128Q5T292 105 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 BEST3Q8N1M1 668 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 NABP1Q96AH0 204 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 LIN37Q96GY3 246 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 NELFAQ9H3P2 528 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 FN3KRPQ9HA64 309 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 FREM2Q5SZK8 3169 aa17.2■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR5H15A6NDH6 313 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 CD8AP01732 235 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 PMP2P02689 132 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 NMBP08949 121 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 LIN54Q6MZP7 749 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 CRIP3Q6Q6R5 217 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 LYG2Q86SG7 212 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 RPS19BP1Q86WX3 136 aaKnown RBP17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 LRRC18Q8N456 261 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM156Q8N614 296 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM41AQ96HV5 264 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 CXorf58Q96LI9 332 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 C1QTNF6Q9BXI9 259 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 RDH8Q9NYR8 311 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 PLEKHA6Q9Y2H5 1048 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 CNTRLQ7Z7A1 2325 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 MYO7BQ6PIF6 2116 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 POM121CA8CG34 1229 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 IGLV3-1P01715 115 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 CHRM2P08172 466 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM50BP56557 158 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 TRA2AQ13595 282 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZMYND11Q15326 602 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 PEAR1Q5VY43 1037 aaPredicted RBP17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM123Q8N131 208 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZDHHC22Q8N966 263 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR9K2Q8NGE7 335 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms