RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 C1orf100Q5SVJ3 147 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SLC35D2Q76EJ3 337 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 NDUFAF7Q7L592 441 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 FTMTQ8N4E7 242 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SPEM1Q8N4L4 309 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM229BQ8NBD8 167 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 CLEC1AQ8NC01 280 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 ADPRHL1Q8NDY3 354 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 NFAM1Q8NET5 270 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SLC26A10Q8NG04 563 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 OR4C16Q8NGL9 310 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 STT3BQ8TCJ2 826 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 DUSP19Q8WTR2 217 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SLC25A28Q96A46 364 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 DDIT4LQ96D03 193 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SLC25A21Q9BQT8 299 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SEC22CQ9BRL7 303 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 CHST11Q9NPF2 352 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 KLHL13Q9P2N7 655 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 UPB1Q9UBR1 384 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 B3GALT5Q9Y2C3 310 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 LRP12Q9Y561 859 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 MAB21L2Q9Y586 359 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 RANBP2P49792 3224 aaKnown RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 GON4LQ3T8J9 2241 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 PCDH15Q96QU1 1955 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 RP1P56715 2156 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 TRAV18A0A075B6X5 111 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM272A0A1B0GTI8 110 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 A0A1W2PQ72 361 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 RPS10-NUDT3A0A1W2PQS6 291 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 NPIPA5E9PKD4 350 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 H0YC42 278 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 MS4A18H0YCH9 400 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 M0R233 179 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 LDLRAD4O15165 306 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 BCAT2O15382 392 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 DOK2O60496 412 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 SCGNO76038 276 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 TNFRSF6BO95407 300 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 PLGP00747 810 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 GIMD1P0DJR0 217 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 HTR2CP28335 458 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 CSNK1EP49674 416 aaKnown RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 TAS2R19P59542 299 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 RAB14P61106 215 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 TSPAN5P62079 268 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 MFGE8Q08431 387 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 MS4A18Q3C1V0 323 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 PRAMEF17Q5VTA0 474 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 C1orf189Q5VU69 101 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ASPHD2Q6ICH7 369 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 OR7E24Q6IFN5 339 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 RAB12Q6IQ22 244 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM71Q6P5X7 295 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 Q6YL49 198 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 LANCL3Q6ZV70 420 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ANKRD37Q7Z713 158 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ELMOD2Q8IZ81 293 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 APCDD1LQ8NCL9 501 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 OR5L2Q8NGL0 311 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ST7LQ8TDW4 575 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 CCDC107Q8WV48 283 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 C17orf50Q8WW18 174 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ATOH1Q92858 354 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 SLC25A44Q96H78 314 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ULBP3Q9BZM4 244 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 C1orf198Q9H425 327 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 BEX1Q9HBH7 125 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 SLC22A11Q9NSA0 550 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 SERTAD4Q9NUC0 356 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ALKBH4Q9NXW9 302 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 CTSFQ9UBX1 484 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF69Q9UC07 566 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 ING1Q9UK53 422 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-201ENST00000241393 NPIPA1Q9UND3 350 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 GTF2A1LQ9UNN4 478 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 SLC22A13Q9Y226 551 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 REV3LO60673 3130 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 SPAG17Q6Q759 2223 aa6.94□□□□□ -1.3
CXCR4-201ENST00000241393 VSTM2BA6NLU5 285 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PRRG2O14669 202 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 DNPH1O43598 174 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ALOX12BO75342 701 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 MPC2O95563 127 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GTF2F2P13984 249 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ANXA7P20073 488 aaKnown RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 M6PRP20645 277 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 FKBP2P26885 142 aaKnown RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 HSD11B1P28845 292 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 DNASE1L1P49184 302 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 EFNB2P52799 333 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 HSF1Q00613 529 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PLA2G7Q13093 441 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 EXOSC2Q13868 293 aaKnown RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OPCMLQ14982 345 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ZMYND11Q15326 602 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 NKAIN1Q4KMZ8 207 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms