RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 NUP54Q7Z3B4 507 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 PBOV1Q9GZY1 135 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 TREM1Q9NP99 234 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 CTSFQ9UBX1 484 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 MLXQ9UH92 298 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 NCOA6Q14686 2063 aaPredicted RBP13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 PNLIPRP2P54317 469 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 BIDP55957 195 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 CLDN6P56747 220 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 FOXK1P85037 733 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 SCRN3Q0VDG4 424 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 MFAP5Q13361 173 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 COL13A1Q5TAT6 717 aaPredicted RBP13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 H3F3CQ6NXT2 135 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 NKAIN3Q8N8D7 197 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 OR1L3Q8NH93 324 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 TMEM230Q96A57 120 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 PHYHIPLQ96FC7 376 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 VN1R1Q9GZP7 353 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 HRH4Q9H3N8 390 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 C5orf66Q9H5L9 145 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 SEC61A2Q9H9S3 476 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 CYTL1Q9NRR1 136 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 SUSD2Q9UGT4 822 aa13.64□□□□□ -0.23
PCDHB8-201ENST00000239444 H7C2Y5 167 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ADAM10O14672 748 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 FARS2O95363 451 aaKnown RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 GALNSP34059 522 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ZNF93P35789 620 aaPredicted RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 TLE3Q04726 772 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 CARD17Q5XLA6 110 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 GLIPR1L1Q6UWM5 242 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 SLC29A4Q7RTT9 530 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ZDHHC22Q8N966 263 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 NPRL2Q8WTW4 380 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ZNF319Q9P2F9 582 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 TLCD2A6NGC4 264 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 AGPAT2O15120 278 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 GLAP06280 429 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 HLA-GP17693 338 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 HOXA1P49639 335 aaPredicted RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 OR1D5P58170 312 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 HSF1Q00613 529 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 AIMP2Q13155 320 aaKnown RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 AKIRIN2Q53H80 203 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 PHF19Q5T6S3 580 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 RNF133Q8WVZ7 376 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 FAM71F1Q96KD3 344 aaPredicted RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 LPAR5Q9H1C0 372 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ESRP2Q9H6T0 727 aaKnown RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ZNF629Q9UEG4 869 aaPredicted RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 A0A0A6YYH2 397 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 C5orf63A6NC05 138 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 A6NJ64 397 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 NUDT21O43809 227 aaKnown RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 FOLR1P15328 257 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 NME1P15531 152 aaKnown RBP13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 RAB6AP20340 208 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 ID4P47928 161 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 SGCAQ16586 387 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 BAP18Q8IXM2 172 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 SLC22A24Q8N4F4 322 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 TSTD1Q8NFU3 115 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 UCK1Q9HA47 277 aa13.63□□□□□ -0.23
PCDHB8-201ENST00000239444 LILRA5A6NI73 299 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 DBX1A6NMT0 343 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 IGHMP01871 453 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 PVALBP20472 110 aaPredicted RBP13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 TDGQ13569 410 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 ANKRD55Q3KP44 614 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 FAM209BQ5JX69 171 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 CLEC18BQ6UXF7 455 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 ABHD12BQ7Z5M8 362 aaPredicted RBP13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 CCDC36Q8IYA8 594 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 SVBPQ8N300 66 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 OR10H5Q8NGA6 315 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 OR1N1Q8NGS0 311 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 OR10C1Q96KK4 312 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 GSKIPQ9P0R6 139 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 MMACHCQ9Y4U1 282 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 A0A1W2PQD3 144 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 A0A1W2PR77 199 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 H3BMH7 237 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 FGF16O43320 207 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 RCC1P18754 421 aaPredicted RBP13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 HSD11B1P28845 292 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 MMP16P51512 607 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 FOXF1Q12946 379 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 ZNF585AQ6P3V2 769 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 KLHL24Q6TFL4 600 aa13.62□□□□□ -0.23
PCDHB8-201ENST00000239444 DRAM2Q6UX65 266 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms