RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CHMP1BQ7LBR1 199 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 CHST4Q8NCG5 386 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 CCDC54Q8NEL0 328 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 NKD1Q969G9 470 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 MARVELD3Q96A59 401 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 CMBLQ96DG6 245 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 ELMOD3Q96FG2 381 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 UCN2Q96RP3 112 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 ANAPC10Q9UM13 185 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 MAB21L2Q9Y586 359 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 NCOR1O75376 2440 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 L7N2F9 121 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 STK17BO94768 372 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 CFDP00746 253 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 GSTP1P09211 210 aaKnown RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 SP9P0CG40 484 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 ALDH3B1P43353 468 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 ECH1Q13011 328 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 RSPO1Q2MKA7 263 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF528Q3MIS6 628 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 RNASE10Q5GAN6 216 aaKnown RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 GLIPR1L1Q6UWM5 242 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 TRAPPC6BQ86SZ2 158 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 C20orf196Q8IYI0 205 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 BEST3Q8N1M1 668 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 C12orf45Q8N5I9 185 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 ZBTB44Q8NCP5 570 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 OR4S1Q8NGB4 309 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 KCNE4Q8WWG9 221 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 FAM71F1Q96KD3 344 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 CITED4Q96RK1 184 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 SLX1AQ9BQ83 275 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 SMOC1Q9H4F8 434 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 TCFL5Q9UL49 500 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 MRPS28Q9Y2Q9 187 aaKnown RBP14.24□□□□□ -0.13
UBE3D-201ENST00000237186 FLVCR1Q9Y5Y0 555 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 BDP1A6H8Y1 2624 aa14.24□□□□□ -0.13
UBE3D-201ENST00000237186 E9PLN8 166 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 GOSR2O14653 212 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 APOC1P02654 83 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 NAT1P18440 290 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 CASRP41180 1078 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SRSF4Q08170 494 aaKnown RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SSPNQ14714 243 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 FAM27BQ5VT28 67 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 RNF144BQ7Z419 303 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 COMMD2Q86X83 199 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 ZDHHC22Q8N966 263 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 ANGPTL6Q8NI99 470 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 C10orf35Q96D05 121 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 JSRP1Q96MG2 331 aaPredicted RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 ZPBPQ9BS86 351 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SELENOIQ9C0D9 397 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 GHRLQ9UBU3 117 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 V9GYS6 101 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 DMDP11532 3685 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 VPS13AQ96RL7 3174 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 IGHV3-15A0A0B4J1V0 119 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 IGKV1-9A0A0C4DH69 117 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 G3V3Y1 287 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SSX5O60225 188 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SIX6O95475 246 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 WDPCPO95876 746 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF35P13682 527 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 ENPP1P22413 925 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 UBE2MP61081 183 aaKnown RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 MRPS34P82930 218 aaKnown RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 Q0VFX4 171 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SLC25A42Q86VD7 318 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF101Q8IZC7 436 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 PGAM5Q96HS1 289 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 SFXN2Q96NB2 322 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 GSX2Q9BZM3 304 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 FARSAQ9Y285 508 aaKnown RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 PLEKHA6Q9Y2H5 1048 aa14.23□□□□□ -0.13
UBE3D-201ENST00000237186 MRPS18CQ9Y3D5 142 aaKnown RBP14.23□□□□□ -0.13
UBE3D-201ENST00000237186 WDFY3Q8IZQ1 3526 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 A0A0A6YYD4 124 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 TNFSF11O14788 317 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 SMAD9O15198 467 aaKnown RBP14.22□□□□□ -0.13
UBE3D-201ENST00000237186 CDC14BO60729 498 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 HPP00738 406 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 P04436 131 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 GNB3P16520 340 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 HLA-GP17693 338 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 THBS4P35443 961 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 P2RX3P56373 397 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 GMFBP60983 142 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 CXADRP78310 365 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 PNLIPRP3Q17RR3 467 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 HYAL4Q2M3T9 481 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 LY6G6FQ5SQ64 297 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 DCAF12L2Q5VW00 463 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 LPCAT3Q6P1A2 487 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 FAHD2BQ6P2I3 314 aaPredicted RBP14.22□□□□□ -0.13
UBE3D-201ENST00000237186 WDR87Q6ZQQ6 2873 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 NAXDQ8IW45 347 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 FAM89BQ8N5H3 189 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 GVQW1Q8N7I0 195 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms