RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 A0A0B4J2E0 115 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 A0A1B0GX12 115 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 C9J4A7 227 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 BCAT2O15382 392 aaPredicted RBP12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 SCGNO76038 276 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 LYPD3O95274 346 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 GZMBP10144 247 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 RBMXP38159 391 aaKnown RBP12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 SLC6A9P48067 706 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 TAS2R31P59538 309 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 NTHL1P78549 312 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 LINC01590Q5TEZ4 76 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 PLXDC2Q6UX71 529 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 M1APQ8TC57 530 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 GAB2Q9UQC2 676 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 TRBV5-7A0A0A0MS05 114 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 TAAR5O14804 337 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 CD1AP06126 327 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 MPZP25189 248 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 GABRA4P48169 554 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 TRA2BP62995 288 aaKnown RBP12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 GGTLC2Q14390 218 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 LY6G5CQ5SRR4 150 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 LIPGQ9Y5X9 500 aa12.23□□□□□ -0.45
PCDHB5-201ENST00000231134 AGR2O95994 175 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 PPM1FP49593 454 aaPredicted RBP12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 TRA2AQ13595 282 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 DPY19L2P2Q6ZN68 376 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 NECAP1Q8NC96 275 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 OR4D6Q8NGJ1 314 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 CXorf40AQ8TE69 158 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 LCN9Q8WX39 176 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 ELOVL1Q9BW60 279 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 FBRSQ9HAH7 460 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 LMX1BO60663 402 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 ISXQ2M1V0 245 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 RD3Q7Z3Z2 195 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 C5orf24Q7Z6I8 188 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 RAB42Q8N4Z0 105 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 NOL4LQ96MY1 436 aaPredicted RBP12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 NIPSNAP3BQ9BS92 247 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 C5orf66Q9H5L9 145 aa12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 APOBEC3BQ9UH17 382 aaKnown RBP12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
PCDHB5-201ENST00000231134 VWA8A3KMH1 1905 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 DLEU1O43261 78 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 SFT2D2O95562 160 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 PNPP00491 289 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 OMGP23515 440 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 HOXC8P31273 242 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 CCL20P78556 96 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF681Q96N22 645 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 SLC26A1Q9H2B4 701 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 HCFC1R1Q9NWW0 138 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 INSL5Q9Y5Q6 135 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 CCDC163A0A0D9SF12 145 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF705FA8MVS1 300 aaPredicted RBP12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF705DP0CH99 300 aaPredicted RBP12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 ZNF705BP0CI00 300 aaPredicted RBP12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 MORN1Q5T089 497 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 TMEM215Q68D42 235 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 SLC8B1Q6J4K2 584 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 OPN5Q6U736 354 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 VITQ6UXI7 678 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 PEG10Q86TG7 708 aaKnown RBP12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 EXD3Q8N9H8 876 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 MCHR2Q969V1 340 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 DUSP15Q9H1R2 295 aaPredicted RBP12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 RAB18Q9NP72 206 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 SAGE1Q9NXZ1 904 aa12.21□□□□□ -0.45
PCDHB5-201ENST00000231134 IGKV1-8A0A0C4DH67 115 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 CCL16O15467 120 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 DFFBO76075 338 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 TIMP1P01033 207 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 ZNF888P0CJ79 500 aaPredicted RBP12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 MMP9P14780 707 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 ZNF708P17019 499 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 AMY2BP19961 511 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 CSRP1P21291 193 aaKnown RBP12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 HOXA6P31267 233 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 WASP42768 502 aa12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 PRDX1Q06830 199 aaKnown RBP12.21□□□□□ -0.46
PCDHB5-201ENST00000231134 ALG10Q5BKT4 473 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms