RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NANPQ8TBE9 248 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 YIPF5Q969M3 257 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 ZNF764Q96H86 408 aaPredicted RBP10.37□□□□□ -0.75
NOD1-201ENST00000222823 REEP6Q96HR9 211 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 NIPSNAP3BQ9BS92 247 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 HOXC4P09017 264 aaPredicted RBP10.37□□□□□ -0.75
NOD1-201ENST00000222823 GNB3P16520 340 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 TBPP20226 339 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 ZNF425Q6IV72 752 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 FAM122BQ7Z309 247 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 KCNRGQ8N5I3 272 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 OR1L3Q8NH93 324 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 OR2V1Q8NHB1 315 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 TRIB1Q96RU8 372 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 FBXO34Q9NWN3 711 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 ATPIF1Q9UII2 106 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 TSC2P49815 1807 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 OR5H14A6NHG9 310 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 FIGNL2A6NMB9 653 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 TMEM127O75204 238 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 OR2F2O95006 317 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SEMG1P04279 462 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 LIMS3P0CW19 117 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 LIMS4P0CW20 117 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 MGMTP16455 207 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 DUSP1P28562 367 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 GZMKP49863 264 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 DSCR4P56555 118 aaPredicted RBP10.36□□□□□ -0.75
NOD1-201ENST00000222823 INSM1Q01101 510 aaPredicted RBP10.36□□□□□ -0.75
NOD1-201ENST00000222823 MYBPHQ13203 477 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 OR2F1Q13607 317 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 PRICKLE4Q2TBC4 344 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ELFN2Q5R3F8 820 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 COL13A1Q5TAT6 717 aaPredicted RBP10.36□□□□□ -0.75
NOD1-201ENST00000222823 FAM199XQ6PEV8 388 aaPredicted RBP10.36□□□□□ -0.75
NOD1-201ENST00000222823 ZFP82Q8N141 532 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SAMD10Q9BYL1 202 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ERVMER34-1Q9H9K5 563 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 TRAPPC4Q9Y296 219 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 CSAG2Q9Y5P2 127 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 GREB1Q4ZG55 1949 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 A0A0A6YYJ9 748 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ANKRD34BA5PLL1 514 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SH2D1BO14796 132 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 TXNL1O43396 289 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 FAM157BP0CG42 384 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 IL3RAP26951 378 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ZNF117Q03924 483 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 H2BFWTQ7Z2G1 175 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 RBMXL3Q8N7X1 1067 aaKnown RBP10.36□□□□□ -0.75
NOD1-201ENST00000222823 OR2AK2Q8NG84 335 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 PELI1Q96FA3 418 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 GABRG3Q99928 467 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 PLK3Q9H4B4 646 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 TAF9BQ9HBM6 251 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 FAM60AQ9NP50 221 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 RTTNQ86VV8 2226 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 FAHP16930 419 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 HRH1P35367 487 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 CLDN20P56880 219 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ANKRD16Q6P6B7 361 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ACOT7LQ6ZUV0 252 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SFTPA1Q8IWL2 248 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SLC35G3Q8N808 338 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 OR11G2Q8NGC1 345 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 AKR7LQ8NHP1 331 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 MARCH1Q8TCQ1 289 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 GNRHR2Q96P88 292 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 CYSLTR2Q9NS75 346 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 PPP1R14DQ9NXH3 145 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 ST3GAL6Q9Y274 331 aa10.36□□□□□ -0.75
NOD1-201ENST00000222823 SHISA8B8ZZ34 492 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 C1QCP02747 245 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 CDAP32320 146 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 FABP6P51161 128 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 ZXDCQ2QGD7 858 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 PRAMEF5Q5TYX0 476 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 CD300LDQ6UXZ3 194 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 OR2G3Q8NGZ4 309 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 OR2AE1Q8NHA4 323 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 KCNIP2Q9NS61 270 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SLC23A1Q9UHI7 598 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 PROCRQ9UNN8 238 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 CCDC187A0A096LP49 1063 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 XRCC3O43542 346 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 OR4E1P0C645 316 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 FCGR2CP31995 323 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 HAAOP46952 286 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SLC25A1P53007 311 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 PP6455Q8WZ26 134 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 SHARPINQ9H0F6 387 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 PARP12Q9H0J9 701 aaKnown RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 ZNF355PQ9NSJ1 428 aa10.35□□□□□ -0.75
NOD1-201ENST00000222823 DNAJB12Q9NXW2 375 aaKnown RBP10.35□□□□□ -0.75
NOD1-201ENST00000222823 PLEKHB1Q9UF11 243 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms