RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GLIPR1L1Q6UWM5 242 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 TMPPEQ6ZT21 453 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 COMMD2Q86X83 199 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 ARMC10Q8N2F6 343 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 D2HGDHQ8N465 521 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 CLDN23Q96B33 292 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 CYYR1Q96J86 154 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 SEC61A2Q9H9S3 476 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 SLC39A1Q9NY26 324 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 CEP192Q8TEP8 1941 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 NPIPB13A6NJU9 1138 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 LIPT2A6NK58 231 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 NPIPB4C9JG80 1138 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 ATG12O94817 140 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 MPIG6BO95866 241 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 TBPP20226 339 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 LAP3P28838 519 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 GSK3AP49840 483 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 MICBQ29980 383 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 ZNF529Q6P280 563 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 UQCC3Q6UW78 93 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 GTPBP8Q8N3Z3 284 aaPredicted RBP15.31■□□□□ 0.04
USB1-201ENST00000219281 TMEM104Q8NE00 496 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 PAQR8Q8TEZ7 354 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 LPAR5Q9H1C0 372 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 SERINC1Q9NRX5 453 aa15.31■□□□□ 0.04
USB1-201ENST00000219281 BCAT2O15382 392 aaPredicted RBP15.3■□□□□ 0.04
USB1-201ENST00000219281 SOCS1O15524 211 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 OPN1LWP04000 364 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 SLC2A1P11166 492 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 GPR85P60893 370 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 PABPC1L2AQ5JQF8 200 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 TERB2Q8NHR7 220 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 ROBO4Q8WZ75 1007 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 TMEM41AQ96HV5 264 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 TSNAXQ99598 290 aaKnown RBP15.3■□□□□ 0.04
USB1-201ENST00000219281 RNF126Q9BV68 326 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 BANF2Q9H503 90 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 MRPS28Q9Y2Q9 187 aaKnown RBP15.3■□□□□ 0.04
USB1-201ENST00000219281 POLR1DQ9Y2S0 133 aa15.3■□□□□ 0.04
USB1-201ENST00000219281 TMEM218A2RU14 115 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 RAB19A4D1S5 217 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 VSTM2BA6NLU5 285 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 GPR31O00270 319 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 FGF16O43320 207 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 EFNA2O43921 213 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 NPY4RP50391 375 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 TAS2R31P59538 309 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 PLAC9Q5JTB6 97 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 PLXDC1Q8IUK5 500 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 PLPP5Q8NEB5 264 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 ELP5Q8TE02 316 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 NMES1Q9C002 83 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 ALKBH4Q9NXW9 302 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 FBLN5Q9UBX5 448 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 LHFPL6Q9Y693 200 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 A0A0B4J2A0 478 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 TEX13DA0A0J9YY54 714 aaPredicted RBP15.29■□□□□ 0.04
USB1-201ENST00000219281 F8VVB4 439 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 F8VWA3 439 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 ABCD4O14678 606 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 CHRM2P08172 466 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 CDAP32320 146 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 OR3A4PP47883 348 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 SLC9A3R2Q15599 337 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 ABHD12BQ7Z5M8 362 aaPredicted RBP15.29■□□□□ 0.04
USB1-201ENST00000219281 APCDD1LQ8NCL9 501 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 RAB3CQ96E17 227 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 RRNAD1Q96FB5 475 aaKnown RBP15.29■□□□□ 0.04
USB1-201ENST00000219281 NUDT16L1Q9BRJ7 211 aaKnown RBP15.29■□□□□ 0.04
USB1-201ENST00000219281 PRR13Q9NZ81 148 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 B3GAT1Q9P2W7 334 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 SHPKQ9UHJ6 478 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 PURGQ9UJV8 347 aaKnown RBP15.29■□□□□ 0.04
USB1-201ENST00000219281 B3GALT5Q9Y2C3 310 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 MUC3AQ02505 3323 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 VPS13AQ96RL7 3174 aa15.29■□□□□ 0.04
USB1-201ENST00000219281 A0A1W2PP11 408 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 H0YIZ8 118 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 TPT1P13693 172 aaKnown RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 FOSL2P15408 326 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 ANOS1P23352 680 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 AFF3P51826 1226 aaKnown RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 CLRN1P58418 232 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 TMEM128Q5BJH2 165 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 OR5AS1Q8N127 324 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 STOML3Q8TAV4 291 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 MRPL13Q9BYD1 178 aaKnown RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 C5orf66Q9H5L9 145 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 KLHL13Q9P2N7 655 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 RPH3AQ9Y2J0 694 aaPredicted RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 CDC14BO60729 498 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 ADAP1O75689 374 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 ADCYAP1P18509 176 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 PI3P19957 117 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 CXCL12P48061 93 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 CX3CR1P49238 355 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 MYBPHQ13203 477 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 MFAP5Q13361 173 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 THEM4Q5T1C6 240 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms