RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HEATR1Q9H583 2144 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 LINC00862A6NCI5 91 aa4□□□□□ -1.77
CHD9-201ENST00000219084 TMEM235A6NFC5 223 aa4□□□□□ -1.77
CHD9-201ENST00000219084 A6NJY4 79 aa4□□□□□ -1.77
CHD9-201ENST00000219084 M0QYG6 137 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SSSCA1O60232 199 aa4□□□□□ -1.77
CHD9-201ENST00000219084 PTBP3O95758 552 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 ACKR3P25106 362 aa4□□□□□ -1.77
CHD9-201ENST00000219084 POLR2IP36954 125 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 RAD52P43351 418 aa4□□□□□ -1.77
CHD9-201ENST00000219084 HOXC5Q00444 222 aa4□□□□□ -1.77
CHD9-201ENST00000219084 RPS19BP1Q86WX3 136 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 C1orf174Q8IYL3 243 aa4□□□□□ -1.77
CHD9-201ENST00000219084 LRRC18Q8N456 261 aa4□□□□□ -1.77
CHD9-201ENST00000219084 OR4C16Q8NGL9 310 aa4□□□□□ -1.77
CHD9-201ENST00000219084 NPRL2Q8WTW4 380 aa4□□□□□ -1.77
CHD9-201ENST00000219084 NDFIP1Q9BT67 221 aa4□□□□□ -1.77
CHD9-201ENST00000219084 HINT2Q9BX68 163 aa4□□□□□ -1.77
CHD9-201ENST00000219084 CTDSP1Q9GZU7 261 aa4□□□□□ -1.77
CHD9-201ENST00000219084 A4GNTQ9UNA3 340 aa4□□□□□ -1.77
CHD9-201ENST00000219084 F5P12259 2224 aa4□□□□□ -1.77
CHD9-201ENST00000219084 VWA8A3KMH1 1905 aa4□□□□□ -1.77
CHD9-201ENST00000219084 TMEM131Q92545 1883 aa4□□□□□ -1.77
CHD9-201ENST00000219084 FAM166BA8MTA8 275 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ZNF724A8MTY0 619 aa4□□□□□ -1.77
CHD9-201ENST00000219084 GPR31O00270 319 aa4□□□□□ -1.77
CHD9-201ENST00000219084 CLN5O75503 358 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SIX6O95475 246 aa4□□□□□ -1.77
CHD9-201ENST00000219084 KLKB1P03952 638 aa4□□□□□ -1.77
CHD9-201ENST00000219084 FGF7P21781 194 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SRP9P49458 86 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 ASCL1P50553 236 aa4□□□□□ -1.77
CHD9-201ENST00000219084 RAB13P51153 203 aa4□□□□□ -1.77
CHD9-201ENST00000219084 HIST1H3AP68431 136 aa4□□□□□ -1.77
CHD9-201ENST00000219084 CDONQ4KMG0 1287 aa4□□□□□ -1.77
CHD9-201ENST00000219084 LAIR1Q6GTX8 287 aa4□□□□□ -1.77
CHD9-201ENST00000219084 JMJD6Q6NYC1 403 aaPredicted RBP4□□□□□ -1.77
CHD9-201ENST00000219084 NUFIP2Q7Z417 695 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 NOXO1Q8NFA2 376 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SCMH1Q96GD3 660 aa4□□□□□ -1.77
CHD9-201ENST00000219084 MRGPRX3Q96LB0 322 aa4□□□□□ -1.77
CHD9-201ENST00000219084 RNF2Q99496 336 aa4□□□□□ -1.77
CHD9-201ENST00000219084 MYEF2Q9P2K5 600 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 GJB3O75712 270 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SNCGO76070 127 aa4□□□□□ -1.77
CHD9-201ENST00000219084 IGHA1P01876 353 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SEMG1P04279 462 aa4□□□□□ -1.77
CHD9-201ENST00000219084 NDUFA6P56556 154 aa4□□□□□ -1.77
CHD9-201ENST00000219084 OR10A3P58181 314 aa4□□□□□ -1.77
CHD9-201ENST00000219084 UBE2G1P62253 170 aa4□□□□□ -1.77
CHD9-201ENST00000219084 PJVKQ0ZLH3 352 aa4□□□□□ -1.77
CHD9-201ENST00000219084 HABP2Q14520 560 aaPredicted RBP4□□□□□ -1.77
CHD9-201ENST00000219084 GPNMBQ14956 572 aa4□□□□□ -1.77
CHD9-201ENST00000219084 BEX5Q5H9J7 111 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ZNF787Q6DD87 383 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ACSM5Q6NUN0 579 aa4□□□□□ -1.77
CHD9-201ENST00000219084 CYHR1Q6ZMK1 362 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SDSLQ96GA7 329 aa4□□□□□ -1.77
CHD9-201ENST00000219084 REEP6Q96HR9 211 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ZNF2Q9BSG1 426 aaPredicted RBP4□□□□□ -1.77
CHD9-201ENST00000219084 COQ3Q9NZJ6 369 aa4□□□□□ -1.77
CHD9-201ENST00000219084 M0R135 149 aa4□□□□□ -1.77
CHD9-201ENST00000219084 CXCL10P02778 98 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SULT1A3P0DMM9 295 aa4□□□□□ -1.77
CHD9-201ENST00000219084 SULT1A4P0DMN0 295 aa4□□□□□ -1.77
CHD9-201ENST00000219084 EN2P19622 333 aaPredicted RBP4□□□□□ -1.77
CHD9-201ENST00000219084 ALOX5APP20292 161 aa4□□□□□ -1.77
CHD9-201ENST00000219084 IRS1P35568 1242 aa4□□□□□ -1.77
CHD9-201ENST00000219084 CSNK1EP49674 416 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 DLK1P80370 383 aa4□□□□□ -1.77
CHD9-201ENST00000219084 DEFB110Q30KQ9 67 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ZDHHC23Q8IYP9 409 aa4□□□□□ -1.77
CHD9-201ENST00000219084 PRR22Q8IZ63 422 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ZNF687Q8N1G0 1237 aa4□□□□□ -1.77
CHD9-201ENST00000219084 TMEM99Q8N816 258 aa4□□□□□ -1.77
CHD9-201ENST00000219084 OR4S1Q8NGB4 309 aa4□□□□□ -1.77
CHD9-201ENST00000219084 OR51F2Q8NH61 342 aa4□□□□□ -1.77
CHD9-201ENST00000219084 BADQ92934 168 aa4□□□□□ -1.77
CHD9-201ENST00000219084 PIK3IP1Q96FE7 263 aa4□□□□□ -1.77
CHD9-201ENST00000219084 ZNF799Q96GE5 643 aa4□□□□□ -1.77
CHD9-201ENST00000219084 NUDT16L1Q9BRJ7 211 aaKnown RBP4□□□□□ -1.77
CHD9-201ENST00000219084 CA10Q9NS85 328 aa4□□□□□ -1.77
CHD9-201ENST00000219084 OCIAD1Q9NX40 245 aa4□□□□□ -1.77
CHD9-201ENST00000219084 OR6C68A6NDL8 312 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CBX7O95931 251 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 MMP7P09237 267 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 GPR12P47775 334 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CXCL12P48061 93 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 LIMK1P53667 647 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 PIGPP57054 158 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ERHP84090 104 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 EEF1A2Q05639 463 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 MIDNQ504T8 468 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 NCR3LG1Q68D85 454 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 TMEM179BQ7Z7N9 219 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 CA13Q8N1Q1 262 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR10P1Q8NGE3 313 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 NUDCD2Q8WVJ2 157 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 MRGPRX1Q96LB2 322 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 RHOFQ9HBH0 211 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms