RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 DCDP81605 110 aaKnown RBP9.47□□□□□ -0.89
VCL-201ENST00000211998 SIGLEC14Q08ET2 396 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 PPP1R1AQ13522 171 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 LTC4SQ16873 150 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 RPL7L1Q6DKI1 246 aaKnown RBP9.47□□□□□ -0.89
VCL-201ENST00000211998 PET117Q6UWS5 81 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 C19orf35Q6ZS72 473 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 ABI3BPQ7Z7G0 1075 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 S100A7AQ86SG5 101 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 RLN3Q8WXF3 142 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 FAM234AQ9H0X4 552 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 LOC102723971A0A1B0GUV8 181 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 AQP7P3A6NL99 342 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 PTP4A3O75365 173 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 SLC25A4P12235 298 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 COX5AP20674 150 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 RAB7AP51149 207 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 SSR4P51571 173 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 PIGPP57054 158 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 MFAP5Q13361 173 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 AGBL4Q5VU57 503 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 CALHM3Q86XJ0 350 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 SLC38A9Q8NBW4 561 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 MUCL1Q96DR8 90 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 RAB33BQ9H082 229 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 FAM166BA8MTA8 275 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 KIAA1324LA8MWY0 1029 aaPredicted RBP9.47□□□□□ -0.89
VCL-201ENST00000211998 HPXP02790 462 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 ABOP16442 354 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 S100A7P31151 101 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 MFSD12Q6NUT3 480 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 TRAV36DV7A0A075B6V5 113 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 CDRT15L2A8MXV6 281 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 EDIL3O43854 480 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 TMEM127O75204 238 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 CST7O76096 145 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 OPN1MWP04001 364 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 OPN1MW2P0DN77 364 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 OPN1MW3P0DN78 364 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 LIM2P55344 173 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 GUCA2BQ16661 112 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 CNEP1R1Q8N9A8 125 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 UTP23Q9BRU9 249 aaKnown RBP9.47□□□□□ -0.89
VCL-201ENST00000211998 HS3ST3A1Q9Y663 406 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 RGPD5Q99666 1765 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 CDC14CA4D256 554 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 MFSD2BA6NFX1 497 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 SOX15O60248 233 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 SKP2Q13309 424 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 MLF2Q15773 248 aaPredicted RBP9.46□□□□□ -0.89
VCL-201ENST00000211998 ZNF79Q15937 498 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 DPPA3Q6W0C5 159 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 C17orf78Q8N4C9 275 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 C11orf42Q8N5U0 333 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 SLC26A10Q8NG04 563 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 OR5K3A6NET4 321 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 RPL13AP40429 203 aaKnown RBP9.46□□□□□ -0.89
VCL-201ENST00000211998 RAB32Q13637 225 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 MCHR2Q969V1 340 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 SEMA6CQ9H3T2 930 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 ADGRL4Q9HBW9 690 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 MARCH5Q9NX47 278 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 MTFP1Q9UDX5 166 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 NAT8BQ9UHF3 227 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 COA3Q9Y2R0 106 aaPredicted RBP9.46□□□□□ -0.89
VCL-201ENST00000211998 SIT1Q9Y3P8 196 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 DMRT1Q9Y5R6 373 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 C5P01031 1676 aa9.46□□□□□ -0.89
VCL-201ENST00000211998 ERVFC1-1P60608 527 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 POLR2GP62487 172 aaKnown RBP eCLIP9.46□□□□□ -0.9
VCL-201ENST00000211998 GABREP78334 506 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 NHLH2Q02577 135 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 FOXO1Q12778 655 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 UBE2V2Q15819 145 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 RNASEKQ6P5S7 137 aaKnown RBP9.46□□□□□ -0.9
VCL-201ENST00000211998 SLC16A14Q7RTX9 510 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 MARCH3Q86UD3 253 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 ZDHHC22Q8N966 263 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 GPR32P1Q8NGA4 272 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 SLC46A1Q96NT5 459 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 PITPNC1Q9UKF7 332 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 AMDHD2Q9Y303 409 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 C9orf170A2RU37 121 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 M0R1X1 148 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 HTR5AP47898 357 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 OR8G1Q15617 311 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 RTN4IP1Q8WWV3 396 aaPredicted RBP9.46□□□□□ -0.9
VCL-201ENST00000211998 FER1L6-AS2Q96M78 137 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 JAM3Q9BX67 310 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 PIGLQ9Y2B2 252 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.9
VCL-201ENST00000211998 TLCD2A6NGC4 264 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 ABLIM3O94929 683 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 VWA2Q5GFL6 755 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 STUMQ69YW2 141 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PLPP6Q8IY26 295 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 OR2D3Q8NGH3 330 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms