RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Abhd16aQ9Z1Q2 558 aa10.99□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tcrg-V3A0A0G2JEW2 117 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr231E9Q0M4 307 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Lin7cO88952 197 aaKnown RBP10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 P01636 108 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Il5P04401 133 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gpr83P30731 423 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Taar6Q5QD13 345 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cpeb4Q7TN98 729 aaKnown RBP10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cggbp1Q8BHG9 167 aaKnown RBP10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1378Q8VGH0 315 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r43Q8VIC9 329 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gmpr2Q99L27 348 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fgf21Q9JJN1 210 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sstr5O08858 362 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Wnt7bP28047 349 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ube2iP63280 158 aaKnown RBP10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr151Q60893 309 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pik3ip1Q7TMJ8 264 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Chst8Q8BQ86 417 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sucnr1Q99MT6 317 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Wfdc1Q9ESH5 211 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nudt3Q9JI46 168 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc25a43A2A3V2 341 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr623E9Q382 317 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 H2-M1F7CXU4 344 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Col10a1Q05306 680 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 LcorQ6ZPI3 433 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mvb12aQ78HU3 271 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ppp1r14dQ7TT52 146 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 AtcayQ8BHE3 372 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Aph1aQ8BVF7 265 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adam4Q8CGQ2 763 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr281Q8VET6 311 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1459Q8VFV9 307 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gjc3Q921C1 269 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Spry1Q9QXV9 313 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Srd5a3Q9WUP4 330 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr65A0A1B0GSF4 315 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp873A0A1B0GT64 667 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr110A2RT31 317 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm5239D3YYZ2 122 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Lhx8O35652 367 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nat2P50295 290 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 RanP62827 216 aaKnown RBP10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 ScapQ6GQT6 1276 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr111Q7TRK1 317 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tas1r1Q99PG6 842 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 CnmdQ9Z1F6 334 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 AU041133A0A0J9YVH3 498 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adam34A2RSG8 714 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc10a1O08705 362 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Wsb1O54927 421 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sirt6P59941 334 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tmprss9P69525 1065 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rbp4Q00724 201 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 B4galnt2Q09199 510 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Scarb1Q61009 509 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 CenpoQ8K015 298 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cbr3Q8K354 277 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 CmblQ8R1G2 245 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Angpt4Q9WVH6 509 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr465-ps1A0A0U1RPZ4 315 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm10715J3QP74 227 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rims4P60191 269 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp663Q6NXM6 656 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1371Q7TQT7 311 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Wdr74Q8VCG3 384 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Trappc2Q9CQP2 140 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm6880A3KG45 208 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r129E9QA94 307 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gpr31F8VQN3 319 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm8720K9J7F4 307 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1513L7N457 313 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gpr12P35412 334 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr77Q8VEY9 312 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 GlceQ9EPS3 618 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Elovl4Q9EQC4 312 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ppm1dQ9QZ67 598 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Scgb1b10A0A087WPW0 93 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 4930595M18RikA2RRY9 829 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm13271B1AYH9 182 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fignl2J3QK54 644 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adra2cQ01337 458 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp39Q02525 718 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sim2Q61079 657 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Spaca9Q7TPM5 168 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Actrt3Q8BXF8 369 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Retreg3Q9CQV4 466 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hapln2Q9ESM3 341 aa10.98□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm14403A2BFU4 402 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r80L7N1Z3 308 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mtnd6P03925 172 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 FasP25446 327 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Foxk1P42128 719 aaKnown RBP10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ccr8P56484 353 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mcrip1Q3UGS4 97 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 GcgrQ61606 485 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Clec4a1Q80UI7 245 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q8BZE1 841 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms