RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Prmt3Q922H1 532 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Neurl1Q923S6 574 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Elovl7Q9D2Y9 281 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ppp1r35Q9D8C8 260 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Sorcs1Q9JLC4 1167 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 SpastQ9QYY8 614 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nrg4Q9WTX4 115 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Itpr1P11881 2749 aa7.71□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dmxl2Q8BPN8 3032 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ighv6-6A0A075B5T3 119 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 A0A1L1SR50 188 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 4933403O08RikF6UK53 379 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 H3BKT1 185 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn2r60L7N2A1 853 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Hps1O08983 704 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cdh3P10287 822 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cdh11P55288 796 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Doc2bP70169 412 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1140Q7TR39 311 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 RinlQ80UW3 563 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc6a15Q8BG16 729 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cpne4Q8BLR2 557 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Lrp12Q8BUJ9 858 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 HinfpQ8K1K9 503 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Phospho1Q8R2H9 267 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mfsd6lQ8R3N2 586 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc39a8Q91W10 462 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Steap4Q923B6 470 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mrm2Q9CPY0 246 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Eif3kQ9DBZ5 218 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Eif3fQ9DCH4 361 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Icam4Q9ERM2 262 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc35a2Q9R0M8 390 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Decr2Q9WV68 292 aa7.71□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm21854A0A087WNM4 232 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr727A2RTN7 324 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm15737D3YZR0 106 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm9772F6XPD8 135 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 H2-M1F7CXU4 344 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm5225J3QPL3 108 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tmem178bM0QWJ9 172 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 CrygsO35486 178 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tnfrsf17O88472 185 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tuba1bP05213 451 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 SparcP07214 302 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ctbp2P56546 445 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tuba1aP68369 451 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 HfeP70387 359 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Serpine2Q07235 397 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Kbtbd8Q3UQV5 599 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Nkain3Q3URJ8 181 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Sgk494Q5SYL1 278 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Coq8aQ60936 645 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1321Q7TQW4 319 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Naa40Q8VE10 237 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1491Q8VEZ5 319 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr919Q8VF78 315 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 MallQ91X49 154 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mrgpra6Q91ZC6 301 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Pofut1Q91ZW2 393 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Arl13aQ9D416 372 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mcts1Q9DB27 181 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ssr3Q9DCF9 185 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gstk1Q9DCM2 226 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ahctf1Q8CJF7 2243 aaKnown RBP7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1066A2AK62 313 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1224-ps1A3KGY4 311 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 MsmpB1AWI6 139 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn2r41E9Q5C7 852 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn2r40F6W043 852 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ankrd65F6YK91 380 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Thbs2Q03350 1172 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 HgfQ08048 728 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fut4Q11127 433 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ccdc106Q3ULM0 279 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Il10rbQ61190 349 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 CapslQ6P8Y1 208 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Arhgap22Q8BL80 702 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rrnad1Q8BZG5 475 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 NaxeQ8K4Z3 282 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 CcnqQ8QZR8 250 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr633Q8VF02 312 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1163Q8VFR4 316 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr516Q8VFZ5 314 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gbgt1Q8VI38 347 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fgfrl1Q91V87 529 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Pskh1Q91YA2 424 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc25a46Q9CQS4 418 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slamf9Q9D780 285 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Trp53tg5Q9D976 238 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn1r56Q9EPS9 310 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Lpar3Q9EQ31 354 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr934Q9EQ87 310 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Dnajb8Q9QYI7 227 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Dock9Q8BIK4 2055 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Asxl3Q8C4A5 2259 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm13762A2ATG2 311 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Skint4A7TZF3 474 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr544E9PX47 334 aa7.7□□□□□ -1.18
Trim39-201ENSMUST00000042717 Krt83E9Q1Y9 479 aa7.7□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms