RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Uqcr10Q8R1I1 64 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Rep15Q9D7T1 230 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r137D3YTY1 307 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r143E9PUW9 307 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r157E9Q069 297 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r139E9Q8L6 297 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r112G3UY48 297 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r135K9J7G0 307 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r125L7N227 307 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r116L7N2A6 307 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Rad51dO55230 329 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Hoxb3P09026 433 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Selenbp1P17563 472 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Mmp9P41245 730 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Cpt2P52825 658 aaKnown RBP10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr323Q5NCD0 323 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr1168Q7TR25 312 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Fam98bQ80VD1 429 aaKnown RBP10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Gpr89aQ8BS95 455 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 WrbQ8K0D7 174 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr434Q8VF17 321 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 ShpkQ9D5J6 476 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Vmn1r100Q9EPS5 307 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr948Q9EQ95 321 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Mcm3apQ9WUU9 1971 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Igkv12-38A0A0G2JEI7 115 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Psmb1O09061 240 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Galr1P56479 348 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 1700066B19RikQ3TS39 127 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 1700012B07RikQ3V0S8 276 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Klhdc2Q4G5Y1 406 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Nufip2Q5F2E7 692 aaKnown RBP10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 OmgQ63912 440 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Doxl2Q6IMK7 723 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 NarflQ7TMW6 476 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Upp2Q8CGR7 320 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr578Q8VH17 313 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Sntb1Q99L88 537 aaKnown RBP10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Rnf141Q99MB7 230 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 OcstampQ9D611 498 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Ca13Q9D6N1 262 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 1700020A23RikQ9DA59 131 aa10.28□□□□□ -0.76
Topbp1-201ENSMUST00000035164 FstP47931 344 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Fabp2P55050 132 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Slc16a11Q5NC32 447 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr1385Q7TQT1 309 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Csnk1g2Q8BVP5 415 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Lrrc3bQ8VCH9 259 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Olfr713Q920G5 324 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Pttg1Q9CQJ7 199 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 NmbQ9CR53 121 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Tomm40lQ9CZR3 308 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Ccdc166S4R181 449 aa10.27□□□□□ -0.76
Topbp1-201ENSMUST00000035164 Zfp988F6VKC7 633 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Gm2056J3QQ02 144 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Gstm2P15626 218 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 D17Wsu92eQ3TT38 291 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Adam12Q61824 903 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 CstbQ62426 98 aaKnown RBP10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Dact2Q7TN08 757 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 CblcQ80XL1 496 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Zfp955aQ80XR7 545 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Tmbim1Q8BJZ3 309 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Cdhr3Q8BL00 831 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 PhyhipQ8K0S0 330 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Olfr883Q8VF64 309 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Dcbld1Q9D4J3 503 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Arl6ip1Q9JKW0 203 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Lama2Q60675 3118 aaKnown RBP10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Zfp69A2A761 587 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Wdr25E9Q349 535 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Rdh19G5E8H9 318 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Bbip1J3QMK2 67 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Opn1mwO35599 359 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 FauP35545 74 aaKnown RBP10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Klf2Q60843 354 aaKnown RBP10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Npepl1Q6NSR8 524 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Olfr1148Q7TR35 314 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Colec10Q8CF98 277 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Olfr970Q8VFN3 311 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Olfr131Q8VGC8 314 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 MallQ91X49 154 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Flvcr2Q91X85 551 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 NtmQ99PJ0 344 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Senp8Q9D2Z4 221 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Zfp300A2AE21 645 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Kiaa1324A2AFS3 1009 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Mptx2D3YYJ7 219 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Vmn1r86L7N213 316 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Tmem178bM0QWJ9 172 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Tspan6O70401 245 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Pfdn2O70591 154 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Fgf13P70377 245 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Ceacam19Q3TQ88 271 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Gm1673Q3UR78 90 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Svs6Q64356 99 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Tnfsfm13Q8BXS2 410 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 RhofQ8BYP3 211 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Arl6ip5Q8R5J9 188 aa10.27□□□□□ -0.77
Topbp1-201ENSMUST00000035164 Naa40Q8VE10 237 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms