RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SLAMF6Q96DU3 332 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 RNFT2Q96EX2 444 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 TBX5Q99593 518 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 COQ7Q99807 217 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 ATF6BQ99941 703 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 WACQ9BTA9 647 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF747Q9BV97 191 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 CDADC1Q9BWV3 514 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 VCX3BQ9H321 246 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 C1orf198Q9H425 327 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 CDH20Q9HBT6 801 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 AMBNQ9NP70 447 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 HAO2Q9NYQ3 351 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 WARS2Q9UGM6 360 aaKnown RBP6.31□□□□□ -1.4
PHGDH-225ENST00000641720 ATPIF1Q9UII2 106 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 POU2F3Q9UKI9 436 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF281Q9Y2X9 895 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 SPEF1Q9Y4P9 236 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
PHGDH-225ENST00000641720 TENM3Q9P273 2699 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 TMEM129A0AVI4 362 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF878C9JN71 531 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 J3QRE1 110 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 PSMD9O00233 223 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 MAGEB4O15481 346 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-225ENST00000641720 MPZL2O60487 215 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 NGFP01138 241 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 FSHBP01225 129 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ACSM4P0C7M7 580 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 COX5BP10606 129 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 NR4A1P22736 598 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 PAX7P23759 505 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 OTX1P32242 354 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-225ENST00000641720 THBS4P35443 961 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF85Q03923 595 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 TMED1Q13445 227 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 MEDAGQ5VYS4 303 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 LRRN1Q6UXK5 716 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 NAA40Q86UY6 237 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ALDH16A1Q8IZ83 802 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 C8orf59Q8N0T1 100 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 LINC01356Q8N9X3 169 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 SETD9Q8NE22 299 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 NUP37Q8NFH4 326 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 IL17RDQ8NFM7 739 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ABHD4Q8TB40 342 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 THEM6Q8WUY1 208 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 HPS1Q92902 700 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 RFKQ969G6 155 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 LGALS12Q96DT0 336 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ARPC5LQ9BPX5 153 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 KCNS3Q9BQ31 491 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 COPS4Q9BT78 406 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 ANKRD60Q9BZ19 345 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 YIPF3Q9GZM5 350 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 PLK3Q9H4B4 646 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 MYOZ1Q9NP98 299 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-225ENST00000641720 CA10Q9NS85 328 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 CENPMQ9NSP4 180 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 CLN6Q9NWW5 311 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 SLCO1C1Q9NYB5 712 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 H2AFY2Q9P0M6 372 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-225ENST00000641720 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.3□□□□□ -1.4
PHGDH-225ENST00000641720 FZR1Q9UM11 496 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 PCDHGB5Q9Y5G0 923 aa6.3□□□□□ -1.4
PHGDH-225ENST00000641720 A0A1W2PQL4 384 aaPredicted RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 F5H5K5 113 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 M0R135 149 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 XPNPEP2O43895 674 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ABHD16AO95870 558 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PTHP01270 115 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 LYNP07948 512 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 SLC2A1P11166 492 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 MYF6P23409 242 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 MPV17P39210 176 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 HSPA13P48723 471 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 CX3CR1P49238 355 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PRKXP51817 358 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PRSS12P56730 875 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 CXCR4P61073 352 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PPP1CBP62140 327 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 GALK2Q01415 458 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ROM1Q03395 351 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 MFGE8Q08431 387 aaPredicted RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 POU4F2Q12837 409 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ECH1Q13011 328 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 EFNB3Q15768 340 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ADIPOQQ15848 244 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 SNCBQ16143 134 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF684Q5T5D7 378 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 ZNF322Q6U7Q0 402 aaPredicted RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PLEKHG7Q6ZR37 379 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 COLCA1Q6ZS62 124 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PRSS45Q7RTY3 260 aa6.29□□□□□ -1.4
PHGDH-225ENST00000641720 PEG10Q86TG7 708 aaKnown RBP6.29□□□□□ -1.4
PHGDH-225ENST00000641720 LRP11Q86VZ4 500 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms