RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 DDX19AQ9NUU7 478 aaKnown RBP2.03□□□□□ -2.08
CCDC7-216ENST00000640058 AHSPQ9NZD4 102 aa2.03□□□□□ -2.08
CCDC7-216ENST00000640058 PDP1Q9P0J1 537 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-216ENST00000640058 UBN2Q6ZU65 1347 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 IGHV3OR16-9A0A0B4J2B5 98 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 IGKV1-8A0A0C4DH67 115 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 GOLGA6L7A0A1B0GV03 622 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 TSPAN11A1L157 253 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 GOLGA8TH3BQL2 631 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 TEX46H3BTG2 121 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 H7C1H1 209 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 BCKDKO14874 412 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 SEMA3DO95025 777 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 APCSP02743 223 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 IFNW1P05000 195 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 PFN2P35080 140 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 FABP6P51161 128 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 GFERP55789 205 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 CLDN8P56748 225 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 RAD51Q06609 339 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 PIGHQ14442 188 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-216ENST00000640058 TAF9Q16594 264 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 RPEL1Q2QD12 228 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 TRMT5Q32P41 509 aaKnown RBP2.02□□□□□ -2.09
CCDC7-216ENST00000640058 SLC16A13Q7RTY0 426 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 CALHM1Q8IU99 346 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 MICU2Q8IYU8 434 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 OR10W1Q8NGF6 305 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 COQ8AQ8NI60 647 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 OR51E1Q8TCB6 317 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 AGR3Q8TD06 166 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 C17orf50Q8WW18 174 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 JSRP1Q96MG2 331 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF317Q96PQ6 595 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-216ENST00000640058 TIMM29Q9BSF4 260 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 MYEF2Q9P2K5 600 aaKnown RBP2.02□□□□□ -2.09
CCDC7-216ENST00000640058 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
CCDC7-216ENST00000640058 TRMT112Q9UI30 125 aaKnown RBP2.02□□□□□ -2.09
CCDC7-216ENST00000640058 A0A0J9YXV3 536 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 A0A1B0GTQ1 180 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 H0YJW9 148 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 GABRPO00591 440 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 ZBTB5O15062 677 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 NVLO15381 856 aaKnown RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 RDH16O75452 317 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 REM1O75628 298 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 CCNE2O96020 404 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF806P0C7X5 589 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 UBCP0CG48 685 aaKnown RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 PGA4P0DJD7 388 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 PGA3P0DJD8 388 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 PGA5P0DJD9 388 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 USF1P22415 310 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 RFC3P40938 356 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 UBE2MP61081 183 aaKnown RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 RPS15AP62244 130 aaKnown RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 RPS23P62266 143 aaKnown RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 MRPL55Q7Z7F7 128 aaKnown RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 HORMAD1Q86X24 394 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 MIR7-3HGQ8N6C7 128 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 OR11H7Q8NGC8 314 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 LRRC29Q8WV35 223 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 BTN2A3PQ96KV6 586 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF488Q96MN9 340 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF717Q9BY31 904 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 EDA2RQ9HAV5 297 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 BEX1Q9HBH7 125 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 MED4Q9NPJ6 270 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 SLC17A7Q9P2U7 560 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 RABL2AQ9UBK7 228 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 PSME2Q9UL46 239 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 SIGLEC9Q9Y336 463 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 MMACHCQ9Y4U1 282 aa2.01□□□□□ -2.09
CCDC7-216ENST00000640058 AHDC1Q5TGY3 1603 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-216ENST00000640058 NID2Q14112 1375 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 TTC41PQ6P2S7 1318 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 PCDH11XQ9BZA7 1347 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 A0A1W2PRD5 423 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 NCF1BA6NI72 391 aaPredicted RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 NCF1CA8MVU1 366 aaPredicted RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 SUPT3HB4E1H0 165 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 LGALS9O00182 355 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 NME4O00746 187 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 CD74P04233 296 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 OR8U9P0C7N5 309 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 STAG3L3P0CL85 134 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 IL32P24001 234 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 MAGEA1P43355 309 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 SNRNP35Q16560 246 aaKnown RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 TCEAL5Q5H9L2 206 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 GCSAMLQ5JQS6 135 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 PIP5KL1Q5T9C9 394 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 SAXO2Q658L1 398 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 WDR82Q6UXN9 313 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 TMCO2Q7Z6W1 182 aaPredicted RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 CBR4Q8N4T8 237 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 LRRC52Q8N7C0 313 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 LRRC75AQ8NAA5 344 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 BBOF1Q8ND07 529 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms