RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 IGHV4-59P01825 116 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 LCATP04180 440 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 CA6P23280 308 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 GSK3BP49841 420 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 SLC7A2P52569 658 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 ECH1Q13011 328 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 PDCD1Q15116 288 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 OR8G1Q15617 311 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 SNAI3Q3KNW1 292 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 FGD3Q5JSP0 725 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 SMARCD3Q6STE5 483 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 PGAP1Q75T13 922 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 ZBTB46Q86UZ6 589 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 LDLRAD3Q86YD5 345 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 C7orf34Q96L11 122 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 ERMAPQ96PL5 475 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 NMNAT3Q96T66 252 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 PKP2Q99959 881 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 TRIM15Q9C019 465 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 FN3KRPQ9HA64 309 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 SRA1Q9HD15 236 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 FGFR1OP2Q9NVK5 253 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 CAPN7Q9Y6W3 813 aa10.03□□□□□ -0.8
CACNA1A-250ENST00000637809 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 ARPC3O15145 178 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 GSTA4O15217 222 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 SLC22A2O15244 555 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 ADAM20O43506 726 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 NCK1P16333 377 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 HIST1H1CP16403 213 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 RHCEP18577 417 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 IER3P46695 156 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 ZNF92Q03936 586 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 MALLQ13021 153 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 KCNJ8Q15842 424 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 METTL11BQ5VVY1 283 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 PNLDC1Q8NA58 520 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 TBC1D15Q8TC07 691 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 SPRYD4Q8WW59 207 aaPredicted RBP10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 LHX4Q969G2 390 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 MAP6Q96JE9 813 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 ADAT1Q9BUB4 502 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 SLC22A4Q9H015 551 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 RASSF4Q9H2L5 321 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 MRPL22Q9NWU5 206 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 KIF17Q9P2E2 1029 aa10.02□□□□□ -0.81
CACNA1A-250ENST00000637809 OR6C68A6NDL8 312 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 OOEPA6NGQ2 149 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 SLC22A31A6NKX4 558 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 NDUFA2O43678 99 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 GMDSO60547 372 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 DIRAS1O95057 198 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 TSPAN15O95858 294 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 GYPAP02724 150 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 OTX1P32242 354 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 ARF6P62330 175 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 TAF9Q16594 264 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 RFX4Q33E94 735 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 BTN2A1Q7KYR7 527 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 MRPL21Q7Z2W9 205 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 FAM90A1Q86YD7 464 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 GCSAMQ8N6F7 178 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 FAM86B1Q8N7N1 296 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 BOLLQ8N9W6 283 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 ZSCAN4Q8NAM6 433 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 OR4K13Q8NH42 304 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 OR52J3Q8NH60 311 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 RP9Q8TA86 221 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 FANK1Q8TC84 345 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 HOPXQ9BPY8 73 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 VIPAS39Q9H9C1 493 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 RPRD1BQ9NQG5 326 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 C1orf123Q9NWV4 160 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 AURKCQ9UQB9 309 aa10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 NOP16Q9Y3C1 178 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-250ENST00000637809 TRAV38-1A0A0B4J264 116 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 M0R135 149 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 DVL1O14640 695 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 OR10H3O60404 316 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 RENP00797 406 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 LHBP01229 141 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 PSKH1P11801 424 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 SLC6A6P31641 620 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 TPTEP56180 551 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 OR8B8Q15620 311 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 C11orf91Q3C1V1 193 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 SLC36A3Q495N2 470 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 GLYATL3Q5SZD4 288 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 TEX36Q5VZQ5 186 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 Q6ZSV7 163 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 ZNF826PQ6ZT77 177 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 HDXQ7Z353 690 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 FGFRL1Q8N441 504 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 OR2AJ1Q8NGZ0 328 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 OR2AE1Q8NHA4 323 aa10□□□□□ -0.81
CACNA1A-250ENST00000637809 FAM162AQ96A26 154 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms