RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MYDGFQ969H8 173 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 C4orf36Q96KX1 117 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 LIME1Q9H400 295 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 PLK3Q9H4B4 646 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 DUSP21Q9H596 190 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 ACOXLQ9NUZ1 547 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 CHCHD3Q9NX63 227 aaKnown RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 F8P00451 2351 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 IGLV3-9A0A075B6K5 115 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 TMEM129A0AVI4 362 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 B9A039 149 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 LOC110117498-PIK3R3F6TDL0 507 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 TBX1O43435 398 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 XRCC2O43543 280 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 RPP14O95059 124 aaKnown RBP13.72□□□□□ -0.21
CLN6-216ENST00000636876 CLPTM1O96005 669 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 PNPP00491 289 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 CD8AP01732 235 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 GCH1P30793 250 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 EVX1P49640 407 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 SELENOVP59797 346 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 MST1LQ2TV78 715 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 GLYATL3Q5SZD4 288 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 C11orf71Q6IPW1 123 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 PAMR1Q6UXH9 720 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 OR8B12Q8NGG6 310 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 RORBQ92753 470 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 RNF166Q96A37 237 aaPredicted RBP13.72□□□□□ -0.21
CLN6-216ENST00000636876 PELI1Q96FA3 418 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 LURAP1Q96LR2 239 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 SIGLEC11Q96RL6 698 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 SYT3Q9BQG1 590 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 TRAF4Q9BUZ4 470 aaPredicted RBP13.72□□□□□ -0.21
CLN6-216ENST00000636876 OR10A2Q9H208 303 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 MOB1AQ9H8S9 216 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 CBLN4Q9NTU7 201 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 ZNF319Q9P2F9 582 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 NUFIP1Q9UHK0 495 aaKnown RBP13.72□□□□□ -0.21
CLN6-216ENST00000636876 CLEC2DQ9UHP7 191 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 DUSP13Q9UII6 198 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 BLOC1S6Q9UL45 172 aa13.72□□□□□ -0.21
CLN6-216ENST00000636876 CAB39Q9Y376 341 aaPredicted RBP13.72□□□□□ -0.21
CLN6-216ENST00000636876 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 ATE1O95260 518 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 IGHV3-13P01766 116 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 RAC2P15153 192 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 C21orf33P30042 268 aaPredicted RBP13.71□□□□□ -0.21
CLN6-216ENST00000636876 PSMB10P40306 273 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 ZNF92Q03936 586 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 PSG7Q13046 419 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 GK2Q14410 553 aaPredicted RBP13.71□□□□□ -0.21
CLN6-216ENST00000636876 HLXQ14774 488 aaPredicted RBP13.71□□□□□ -0.21
CLN6-216ENST00000636876 TIGD6Q17RP2 521 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 SWI5Q1ZZU3 235 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 TMEM255AQ5JRV8 349 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 TMPRSS11AQ6ZMR5 421 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 CATSPERDQ86XM0 798 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 KLHL36Q8N4N3 616 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 OR52N1Q8NH53 320 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 OR2AE1Q8NHA4 323 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 IGFBPL1Q8WX77 278 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 SPSB4Q96A44 273 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 HAVCR1Q96D42 359 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 CMBLQ96DG6 245 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 YTHDF1Q9BYJ9 559 aaKnown RBP13.71□□□□□ -0.21
CLN6-216ENST00000636876 PBOV1Q9GZY1 135 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 OPA3Q9H6K4 179 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 ISG20L2Q9H9L3 353 aaKnown RBP13.71□□□□□ -0.21
CLN6-216ENST00000636876 G6PC2Q9NQR9 355 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 MYEF2Q9P2K5 600 aaKnown RBP13.71□□□□□ -0.21
CLN6-216ENST00000636876 ERVK-18Q9QC07 812 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 OR52A1Q9UKL2 312 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 GTF2A1LQ9UNN4 478 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 LAMP3Q9UQV4 416 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 SNX5Q9Y5X3 404 aa13.71□□□□□ -0.21
CLN6-216ENST00000636876 PDZD2O15018 2839 aa13.71□□□□□ -0.22
CLN6-216ENST00000636876 A0A0U1RQV5 110 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 MT-ND5P03915 603 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 CD53P19397 219 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 KITLGP21583 273 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 SNRPD2P62316 118 aaKnown RBP13.7□□□□□ -0.22
CLN6-216ENST00000636876 BCL2L15Q5TBC7 163 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 RNLSQ5VYX0 342 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 FDX2Q6P4F2 183 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 PGAP1Q75T13 922 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 MRPL21Q7Z2W9 205 aaKnown RBP13.7□□□□□ -0.22
CLN6-216ENST00000636876 SGK3Q96BR1 496 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 CCL19Q99731 98 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 REPIN1Q9BWE0 567 aaKnown RBP13.7□□□□□ -0.22
CLN6-216ENST00000636876 CDCA4Q9BXL8 241 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 RGCCQ9H4X1 137 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 ST6GALNAC2Q9UJ37 374 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
CLN6-216ENST00000636876 EDARQ9UNE0 448 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 USF3Q68DE3 2245 aa13.7□□□□□ -0.22
CLN6-216ENST00000636876 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 RGS10O43665 173 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms