RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 VAPAQ9P0L0 249 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 A0A1W2PRX2 142 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 TRPC5OSA6NMA1 111 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 VIMP08670 466 aaKnown RBP14.72□□□□□ -0.05
CLN6-212ENST00000636020 CTXN1P60606 82 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 OR8G1Q15617 311 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 KRT71Q3SY84 523 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 LIAT1Q6ZQX7 453 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 CROCCP2Q86T23 111 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 LRRC75AQ8NAA5 344 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 C1orf123Q9NWV4 160 aa14.72□□□□□ -0.05
CLN6-212ENST00000636020 IGHV3OR15-7A0A075B7D8 119 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 TRBV5-3A0A0A0MS03 114 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 LCE6AA0A183 80 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 H7C1C5 153 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 RER1O15258 196 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 LHBP01229 141 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 PF4V1P10720 104 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 LCN6P62502 163 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 ELF3P78545 371 aaPredicted RBP14.71□□□□□ -0.05
CLN6-212ENST00000636020 CD83Q01151 205 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
CLN6-212ENST00000636020 NCR3LG1Q68D85 454 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 ZNF826PQ6ZT77 177 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 C8orf46Q8TAG6 207 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 PIFOQ8TCI5 191 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 TMEM239Q8WW34 195 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 CCL13Q99616 98 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 DCTN5Q9BTE1 182 aa14.71□□□□□ -0.05
CLN6-212ENST00000636020 NOP16Q9Y3C1 178 aaKnown RBP14.71□□□□□ -0.05
CLN6-212ENST00000636020 PF4P02776 101 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 CA6P23280 308 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 PAX6P26367 422 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 BMXP51813 675 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 LSM6P62312 80 aaKnown RBP14.7□□□□□ -0.06
CLN6-212ENST00000636020 RSPO1Q2MKA7 263 aaPredicted RBP14.7□□□□□ -0.06
CLN6-212ENST00000636020 TNFAIP8L3Q5GJ75 292 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 MUC7Q8TAX7 377 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 MED4Q9NPJ6 270 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 INPP5EQ9NRR6 644 aa14.7□□□□□ -0.06
CLN6-212ENST00000636020 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
CLN6-212ENST00000636020 UBDO15205 165 aa14.69□□□□□ -0.06
CLN6-212ENST00000636020 POLR3GO15318 223 aaPredicted RBP14.69□□□□□ -0.06
CLN6-212ENST00000636020 AGBL2Q5U5Z8 902 aa14.69□□□□□ -0.06
CLN6-212ENST00000636020 HCP5Q6MZN7 132 aa14.69□□□□□ -0.06
CLN6-212ENST00000636020 SPRYD4Q8WW59 207 aaPredicted RBP14.69□□□□□ -0.06
CLN6-212ENST00000636020 COQ7Q99807 217 aa14.69□□□□□ -0.06
CLN6-212ENST00000636020 SLC22A4Q9H015 551 aa14.69□□□□□ -0.06
CLN6-212ENST00000636020 METTL8Q9H825 291 aaKnown RBP14.69□□□□□ -0.06
CLN6-212ENST00000636020 CORO2BQ9UQ03 480 aa14.69□□□□□ -0.06
CLN6-212ENST00000636020 SF3B6Q9Y3B4 125 aaKnown RBP14.69□□□□□ -0.06
CLN6-212ENST00000636020 TEX13CA0A0J9YWL9 993 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 GMDSO60547 372 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 CTLA4P16410 223 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 HIST1H3AP68431 136 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 DMRTC1Q5HYR2 192 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 WDR38Q5JTN6 314 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 PAGE3Q5JUK9 113 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 NKAPLQ5M9Q1 402 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 HIST2H3PS2Q5TEC6 136 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 HIST2H3AQ71DI3 136 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 FAM216BQ8N7L0 139 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 C11orf65Q8NCR3 313 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 ACOT11Q8WXI4 607 aaPredicted RBP14.68□□□□□ -0.06
CLN6-212ENST00000636020 SLCO4A1Q96BD0 722 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 TLCD1Q96CP7 247 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 OR5M11Q96RB7 305 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 ADAT1Q9BUB4 502 aaKnown RBP14.68□□□□□ -0.06
CLN6-212ENST00000636020 AURKCQ9UQB9 309 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 MED31Q9Y3C7 131 aa14.68□□□□□ -0.06
CLN6-212ENST00000636020 STARD9Q9P2P6 4700 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 EVPLLA8MZ36 301 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 M0R1W7 72 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 RGS16O15492 202 aaPredicted RBP14.67□□□□□ -0.06
CLN6-212ENST00000636020 NDUFB3O43676 98 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 GRPP07492 148 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 KITP10721 976 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 TGM4P49221 684 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 MICBQ29980 383 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 PGAP1Q75T13 922 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 SLC36A1Q7Z2H8 476 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 DPF1Q92782 380 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 TAMM41Q96BW9 452 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 MAP6Q96JE9 813 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 ATP6V1G3Q96LB4 118 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 OR52B2Q96RD2 323 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 CDCA4Q9BXL8 241 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 HDHD2Q9H0R4 259 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 RIMS3Q9UJD0 308 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 NDUFAF1Q9Y375 327 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 CAPN7Q9Y6W3 813 aa14.67□□□□□ -0.06
CLN6-212ENST00000636020 hCG_1807616A0A1W2PRN6 198 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 A6NLC8 198 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 CD300LBA8K4G0 201 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 AHCYL1O43865 530 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 PEX14O75381 377 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 ZFPL1O95159 310 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 MUC1P15941 1255 aaPredicted RBP14.66□□□□□ -0.06
CLN6-212ENST00000636020 AMY2BP19961 511 aa14.66□□□□□ -0.06
CLN6-212ENST00000636020 LMO1P25800 156 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms