RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 GGTLC2Q14390 218 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 IRF3Q14653 427 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 TBCEQ15813 527 aaPredicted RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 KLHL12Q53G59 568 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 MESTQ5EB52 335 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 THEM4Q5T1C6 240 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 LCN1P1Q5VSP4 162 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 EEF1A1P5Q5VTE0 462 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 XAF1Q6GPH4 301 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 B3GNT6Q6ZMB0 384 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 UBQLNLQ8IYU4 475 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 RBMXL3Q8N7X1 1067 aaKnown RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 NEXN-AS1Q8NBZ9 246 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 PROKR2Q8NFJ6 384 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 OR52I1Q8NGK6 324 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 OR6X1Q8NH79 312 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 FCGR1BQ92637 280 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 SNAPC3Q92966 411 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 INTS12Q96CB8 462 aaKnown RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 LGALS12Q96DT0 336 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 SLC25A44Q96H78 314 aaPredicted RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 DUX5Q96PT3 197 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 RBP7Q96R05 134 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 TUBA1CQ9BQE3 449 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 RHNO1Q9BSD3 238 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 MRPL13Q9BYD1 178 aaKnown RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 SRXN1Q9BYN0 137 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 DEFB127Q9H1M4 99 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 EXO5Q9H790 373 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 ACOT13Q9NPJ3 140 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 RPRD1BQ9NQG5 326 aaKnown RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 CHCHD3Q9NX63 227 aaKnown RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 NDUFA13Q9P0J0 144 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 SLC25A10Q9UBX3 287 aaPredicted RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 DIMT1Q9UNQ2 313 aaKnown RBP4.9□□□□□ -1.63
LINC00254-202ENST00000633813 ERGIC3Q9Y282 383 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 FKBP7Q9Y680 259 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 COMMD3-BMI1R4GMX3 469 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 FREM2Q5SZK8 3169 aa4.9□□□□□ -1.63
LINC00254-202ENST00000633813 EML6Q6ZMW3 1958 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 IGLV5-37A0A075B6J1 123 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 IGKV3D-15A0A087WSY6 115 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 IGHV3-15A0A0B4J1V0 119 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SMIM31A0A1B0GVY4 71 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 ZNF716A6NP11 495 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 NPIPA2E9PIF3 369 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 NPIPA3F8WFD2 350 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 J3QRE1 110 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 K7EM74 188 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 DCTN6O00399 190 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 GPR171O14626 319 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SMAD9O15198 467 aaKnown RBP4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SLC16A7O60669 478 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 RAMP1O60894 148 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 TRMUO75648 421 aaKnown RBP4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SYNGR4O95473 234 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 IGHG1P01857 330 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 GYPBP06028 91 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SBK2P0C263 348 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR2T7P0C7T2 308 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 NR2C1P13056 603 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 MYL12AP19105 171 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 BIDP55957 195 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 PMP22Q01453 160 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SRYQ05066 204 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 RUNX1T1Q06455 604 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 RASGEF1BQ0VAM2 473 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 MELKQ14680 651 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 NEDD8Q15843 81 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 HIST3H3Q16695 136 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 NADK2Q4G0N4 442 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 KRTCAP3Q53RY4 240 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SYT6Q5T7P8 510 aaPredicted RBP4.89□□□□□ -1.63
LINC00254-202ENST00000633813 LINC01590Q5TEZ4 76 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 UBE2UQ5VVX9 321 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 DNM1P34Q6PK57 102 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 FCRLAQ7L513 359 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 CHMP1BQ7LBR1 199 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 C16orf82Q7Z2V1 217 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 EGFL6Q8IUX8 553 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SIAH3Q8IW03 269 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 PM20D2Q8IYS1 436 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR6V1Q8N148 313 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 ACBD7Q8N6N7 88 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 ZIC4Q8N9L1 334 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 POMGNT2Q8NAT1 580 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SYT14Q8NB59 555 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 SCCPDHQ8NBX0 429 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR4F15Q8NGB8 312 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR9K2Q8NGE7 335 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR51G2Q8NGK0 314 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR9Q1Q8NGQ5 310 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 OR2T27Q8NH04 317 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 ZPLD1Q8TCW7 415 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 ROBO4Q8WZ75 1007 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 RORBQ92753 470 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 PNPLA2Q96AD5 504 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 ZMYND19Q96E35 227 aaPredicted RBP4.89□□□□□ -1.63
LINC00254-202ENST00000633813 RNF125Q96EQ8 232 aa4.89□□□□□ -1.63
LINC00254-202ENST00000633813 TSSK2Q96PF2 358 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms