RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	LCN10	Q6JVE6	187 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	OR1J2	Q8NGS2	313 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SPSB2	Q99619	263 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SMAD5	Q99717	465 aa	Known RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	MESP1	Q9BRJ9	268 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	RXFP3	Q9NSD7	469 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659		A0A087WUJ7	227 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF208	O43345	1280 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	PPIH	O43447	177 aa	Known RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	RAB3D	O95716	219 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	NGFR	P08138	427 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	TACSTD2	P09758	323 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	RAB5A	P20339	215 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	MAGEB1	P43366	347 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	RBP2	P50120	134 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	F2RL1	P55085	397 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	CLDN12	P56749	244 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SRSF3	P84103	164 aa	Known RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	WBP2NL	Q6ICG8	309 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	OR13C2	Q8NGS9	318 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF417	Q8TAU3	575 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	GPX8	Q8TED1	209 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	C3orf49	Q96BT1	292 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	CCNL2	Q96S94	520 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	PHB2	Q99623	299 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	LAT2	Q9GZY6	243 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	VCAN	P13611	3396 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659		A0A1W2PQD3	144 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	GDF9	O60383	454 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	CTAG2	O75638	210 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	WNT11	O96014	354 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	CD3D	P04234	171 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	CYC1	P08574	325 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	FAM157C	P0CG43	387 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	CCL4	P13236	92 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	S100A2	P29034	98 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	DVL1P1	P54792	670 aa	Predicted RBP	13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	MEF2D	Q14814	521 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	SSX2	Q16385	188 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	PLA2G2C	Q5R387	149 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	OR52W1	Q6IF63	320 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	MRPL14	Q6P1L8	145 aa	Known RBP	13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	PAPD4	Q6PIY7	484 aa	Known RBP	13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	REC114	Q7Z4M0	266 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	LYG2	Q86SG7	212 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF565	Q8N9K5	539 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	APCDD1L	Q8NCL9	501 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	CLCC1	Q96S66	551 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	WDR77	Q9BQA1	342 aa	Predicted RBP	13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	CHST6	Q9GZX3	395 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	PCDHGA1	Q9Y5H4	931 aa		13.67	□□□□□ -0.22
BBS1-225	ENST00000630659	FBXO24	O75426	580 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	IL2RA	P01589	272 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	HLA-A	P01891	365 aa	Known RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	PTHLH	P12272	177 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF28	P17035	718 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	MPZ	P25189	248 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ITGA3	P26006	1051 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	MAS1L	P35410	378 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	CCR4	P51679	360 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ATP1B3	P54709	279 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	RPS15	P62841	145 aa	Known RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	MST1L	Q2TV78	715 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	CBLN3	Q6UW01	205 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	TMPRSS12	Q86WS5	348 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	COMMD1	Q8N668	190 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ADAMTS17	Q8TE56	1095 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	MITD1	Q8WV92	249 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	WNT2B	Q93097	391 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	LPAR4	Q99677	370 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	MICU1	Q9BPX6	476 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC2A8	Q9NY64	477 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	TRAV27	A0A087WT01	109 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	TRBV5-5	A0A0J9YX44	114 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	LNP1	A1A4G5	178 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ALG1L2	C9J202	215 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	HKR1	P10072	659 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	PSMB6	P28072	239 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC6A8	P48029	635 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	BEX5	Q5H9J7	111 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	C9orf152	Q5JTZ5	239 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	UNQ6126/PRO20091	Q6UXV3	157 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	THSD4	Q6ZMP0	1018 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	HIST2H3A	Q71DI3	136 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	TMED4	Q7Z7H5	227 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	LRRTM1	Q86UE6	522 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	ZDHHC22	Q8N966	263 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	OR51A7	Q8NH64	312 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	TNFRSF13C	Q96RJ3	184 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	NMES1	Q9C002	83 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	WDR54	Q9H977	334 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	FAM86C1	Q9NVL1	165 aa		13.66	□□□□□ -0.22
BBS1-225	ENST00000630659	CACFD1	Q9UGQ2	172 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms